Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CD99P1-205ENST00000527459 561 ntBASIC19.53■□□□□ 0.72
CSMD1Q96PZ7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD1Q96PZ7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD1Q96PZ7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD1Q96PZ7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD1Q96PZ7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD1Q96PZ7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 AL109923.1-201ENST00000618799 583 ntBASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.52■□□□□ 0.72
CSMD1Q96PZ7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSMD1Q96PZ7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSMD1Q96PZ7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSMD1Q96PZ7 BX842568.3-201ENST00000418104 571 ntBASIC19.52■□□□□ 0.71
CSMD1Q96PZ7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 AC008687.6-201ENST00000596318 630 ntBASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD1Q96PZ7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 NCF1B-203ENST00000435988 1254 ntBASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 AC026185.1-201ENST00000445748 174 ntBASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD1Q96PZ7 GUSBP6-202ENST00000438529 1198 ntBASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 MIR6084-201ENST00000622012 110 ntBASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD1Q96PZ7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 AC245100.8-202ENST00000629247 1058 ntBASIC19.48■□□□□ 0.71
CSMD1Q96PZ7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 AC142086.2-201ENST00000569753 217 ntBASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.47■□□□□ 0.71
CSMD1Q96PZ7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.46■□□□□ 0.71
CSMD1Q96PZ7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 AC092171.4-201ENST00000609130 632 ntBASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.45■□□□□ 0.7
CSMD1Q96PZ7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms