Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LINC01006Q8NI28 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.81■□□□□ 0.44
LINC01006Q8NI28 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01006Q8NI28 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC01006Q8NI28 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC01006Q8NI28 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01006Q8NI28 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01006Q8NI28 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 pRNA.6-201ENST00000610482 90 ntBASIC17.79■□□□□ 0.44
LINC01006Q8NI28 pRNA.5-201ENST00000612139 90 ntBASIC17.79■□□□□ 0.44
LINC01006Q8NI28 pRNA.11-201ENST00000618423 90 ntBASIC17.79■□□□□ 0.44
LINC01006Q8NI28 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 pRNA.13-201ENST00000619112 90 ntBASIC17.79■□□□□ 0.44
LINC01006Q8NI28 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01006Q8NI28 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 ALDH1A3-203ENST00000557963 1670 ntBASIC17.78■□□□□ 0.44
LINC01006Q8NI28 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01006Q8NI28 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC01006Q8NI28 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01006Q8NI28 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01006Q8NI28 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LINC01006Q8NI28 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01006Q8NI28 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC01006Q8NI28 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC01006Q8NI28 AC126544.1-201ENST00000580842 1059 ntBASIC17.76■□□□□ 0.43
LINC01006Q8NI28 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01006Q8NI28 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.76■□□□□ 0.43
LINC01006Q8NI28 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC01006Q8NI28 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 AC141586.4-201ENST00000624558 1573 ntBASIC17.74■□□□□ 0.43
LINC01006Q8NI28 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LINC01006Q8NI28 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LINC01006Q8NI28 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LINC01006Q8NI28 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01006Q8NI28 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01006Q8NI28 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC01006Q8NI28 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms