Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK2Q86Y07 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
VRK2Q86Y07 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.97■□□□□ 0.95
VRK2Q86Y07 YBX1P4-201ENST00000392794 808 ntBASIC20.97■□□□□ 0.95
VRK2Q86Y07 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.97■□□□□ 0.95
VRK2Q86Y07 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
VRK2Q86Y07 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.97■□□□□ 0.95
VRK2Q86Y07 AC092068.2-201ENST00000590491 1708 ntBASIC20.97■□□□□ 0.95
VRK2Q86Y07 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VRK2Q86Y07 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VRK2Q86Y07 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK2Q86Y07 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.96■□□□□ 0.95
VRK2Q86Y07 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VRK2Q86Y07 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK2Q86Y07 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.96■□□□□ 0.95
VRK2Q86Y07 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VRK2Q86Y07 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.96■□□□□ 0.95
VRK2Q86Y07 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
VRK2Q86Y07 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VRK2Q86Y07 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VRK2Q86Y07 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VRK2Q86Y07 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VRK2Q86Y07 AC004448.1-201ENST00000458332 883 ntBASIC20.94■□□□□ 0.94
VRK2Q86Y07 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.94■□□□□ 0.94
VRK2Q86Y07 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VRK2Q86Y07 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VRK2Q86Y07 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VRK2Q86Y07 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.93■□□□□ 0.94
VRK2Q86Y07 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.93■□□□□ 0.94
VRK2Q86Y07 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VRK2Q86Y07 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
VRK2Q86Y07 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.93■□□□□ 0.94
VRK2Q86Y07 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
VRK2Q86Y07 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VRK2Q86Y07 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VRK2Q86Y07 DUSP8P3-201ENST00000399571 1760 ntBASIC20.92■□□□□ 0.94
VRK2Q86Y07 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
VRK2Q86Y07 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK2Q86Y07 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK2Q86Y07 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
VRK2Q86Y07 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VRK2Q86Y07 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.92■□□□□ 0.94
VRK2Q86Y07 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.91■□□□□ 0.94
VRK2Q86Y07 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VRK2Q86Y07 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VRK2Q86Y07 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VRK2Q86Y07 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
VRK2Q86Y07 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
VRK2Q86Y07 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.9■□□□□ 0.94
VRK2Q86Y07 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.9■□□□□ 0.94
VRK2Q86Y07 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VRK2Q86Y07 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VRK2Q86Y07 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.89■□□□□ 0.94
VRK2Q86Y07 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VRK2Q86Y07 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VRK2Q86Y07 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VRK2Q86Y07 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VRK2Q86Y07 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VRK2Q86Y07 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.89■□□□□ 0.93
VRK2Q86Y07 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
VRK2Q86Y07 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.89■□□□□ 0.93
VRK2Q86Y07 AL031848.2-201ENST00000607670 837 ntBASIC20.89■□□□□ 0.93
VRK2Q86Y07 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
VRK2Q86Y07 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VRK2Q86Y07 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms