Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.54■□□□□ 0.88
GABRB1P18505 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABRB1P18505 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.54■□□□□ 0.88
GABRB1P18505 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GABRB1P18505 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GABRB1P18505 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.54■□□□□ 0.88
GABRB1P18505 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABRB1P18505 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABRB1P18505 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.54■□□□□ 0.88
GABRB1P18505 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABRB1P18505 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GABRB1P18505 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.53■□□□□ 0.88
GABRB1P18505 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
GABRB1P18505 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GABRB1P18505 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GABRB1P18505 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GABRB1P18505 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GABRB1P18505 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABRB1P18505 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABRB1P18505 ABHD17AP4-201ENST00000411545 909 ntBASIC20.52■□□□□ 0.88
GABRB1P18505 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.52■□□□□ 0.88
GABRB1P18505 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.52■□□□□ 0.88
GABRB1P18505 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.52■□□□□ 0.88
GABRB1P18505 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABRB1P18505 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABRB1P18505 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABRB1P18505 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.52■□□□□ 0.88
GABRB1P18505 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
GABRB1P18505 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
GABRB1P18505 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GABRB1P18505 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
GABRB1P18505 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GABRB1P18505 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABRB1P18505 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GABRB1P18505 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABRB1P18505 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.51■□□□□ 0.87
GABRB1P18505 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GABRB1P18505 ESRRAP2-201ENST00000418437 1549 ntBASIC20.51■□□□□ 0.87
GABRB1P18505 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GABRB1P18505 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.51■□□□□ 0.87
GABRB1P18505 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.5■□□□□ 0.87
GABRB1P18505 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GABRB1P18505 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.5■□□□□ 0.87
GABRB1P18505 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRB1P18505 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.5■□□□□ 0.87
GABRB1P18505 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRB1P18505 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.49■□□□□ 0.87
GABRB1P18505 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.49■□□□□ 0.87
GABRB1P18505 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GABRB1P18505 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRB1P18505 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRB1P18505 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRB1P18505 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.48■□□□□ 0.87
GABRB1P18505 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRB1P18505 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GABRB1P18505 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.48■□□□□ 0.87
GABRB1P18505 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
GABRB1P18505 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.47■□□□□ 0.87
GABRB1P18505 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.47■□□□□ 0.87
GABRB1P18505 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.47■□□□□ 0.87
GABRB1P18505 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GABRB1P18505 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.47■□□□□ 0.87
GABRB1P18505 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.46■□□□□ 0.87
GABRB1P18505 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.46■□□□□ 0.87
GABRB1P18505 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 AC022413.1-201ENST00000624602 984 ntBASIC20.46■□□□□ 0.87
GABRB1P18505 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
GABRB1P18505 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABRB1P18505 AL024507.2-201ENST00000606070 2574 ntBASIC20.45■□□□□ 0.86
GABRB1P18505 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRB1P18505 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.45■□□□□ 0.86
GABRB1P18505 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.45■□□□□ 0.86
GABRB1P18505 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms