Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCRL2O00421 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCRL2O00421 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCRL2O00421 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCRL2O00421 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCRL2O00421 AL121603.2-201ENST00000557373 2117 ntBASIC20.34■□□□□ 0.85
CCRL2O00421 MIR3648-2-201ENST00000581792 180 ntBASIC20.34■□□□□ 0.85
CCRL2O00421 MIR3960-201ENST00000583311 91 ntBASIC20.34■□□□□ 0.85
CCRL2O00421 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.34■□□□□ 0.85
CCRL2O00421 MIR3648-1-201ENST00000615959 180 ntBASIC20.34■□□□□ 0.85
CCRL2O00421 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCRL2O00421 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCRL2O00421 AC242852.2-201ENST00000615738 1807 ntBASIC20.33■□□□□ 0.85
CCRL2O00421 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCRL2O00421 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCRL2O00421 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCRL2O00421 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CCRL2O00421 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CCRL2O00421 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCRL2O00421 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.32■□□□□ 0.84
CCRL2O00421 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.32■□□□□ 0.84
CCRL2O00421 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCRL2O00421 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCRL2O00421 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCRL2O00421 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.32■□□□□ 0.84
CCRL2O00421 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCRL2O00421 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.32■□□□□ 0.84
CCRL2O00421 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCRL2O00421 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.32■□□□□ 0.84
CCRL2O00421 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCRL2O00421 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.31■□□□□ 0.84
CCRL2O00421 AC025884.2-201ENST00000553429 711 ntBASIC20.31■□□□□ 0.84
CCRL2O00421 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCRL2O00421 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCRL2O00421 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.31■□□□□ 0.84
CCRL2O00421 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCRL2O00421 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCRL2O00421 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.3■□□□□ 0.84
CCRL2O00421 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.3■□□□□ 0.84
CCRL2O00421 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.3■□□□□ 0.84
CCRL2O00421 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CCRL2O00421 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.3■□□□□ 0.84
CCRL2O00421 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCRL2O00421 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCRL2O00421 AC016575.1-201ENST00000607026 382 ntBASIC20.3■□□□□ 0.84
CCRL2O00421 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCRL2O00421 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
CCRL2O00421 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.29■□□□□ 0.84
CCRL2O00421 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCRL2O00421 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCRL2O00421 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCRL2O00421 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.28■□□□□ 0.84
CCRL2O00421 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.28■□□□□ 0.84
CCRL2O00421 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
CCRL2O00421 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCRL2O00421 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCRL2O00421 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCRL2O00421 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCRL2O00421 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCRL2O00421 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCRL2O00421 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.28■□□□□ 0.84
CCRL2O00421 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCRL2O00421 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.27■□□□□ 0.84
CCRL2O00421 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.27■□□□□ 0.84
CCRL2O00421 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCRL2O00421 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.27■□□□□ 0.83
CCRL2O00421 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCRL2O00421 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCRL2O00421 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCRL2O00421 AL137060.1-201ENST00000618151 2648 ntBASIC20.26■□□□□ 0.83
CCRL2O00421 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCRL2O00421 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCRL2O00421 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.26■□□□□ 0.83
CCRL2O00421 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCRL2O00421 ESRRAP2-201ENST00000418437 1549 ntBASIC20.26■□□□□ 0.83
CCRL2O00421 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCRL2O00421 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.26■□□□□ 0.83
CCRL2O00421 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCRL2O00421 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.26■□□□□ 0.83
CCRL2O00421 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCRL2O00421 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCRL2O00421 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.25■□□□□ 0.83
CCRL2O00421 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCRL2O00421 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms