Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC110285.6-201ENST00000617652 491 ntBASIC25.58■■□□□ 1.69
DDX39AO00148 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.58■■□□□ 1.68
DDX39AO00148 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX39AO00148 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.57■■□□□ 1.68
DDX39AO00148 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
DDX39AO00148 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
DDX39AO00148 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX39AO00148 LINC00543-201ENST00000567234 1845 ntBASIC25.56■■□□□ 1.68
DDX39AO00148 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX39AO00148 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX39AO00148 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.56■■□□□ 1.68
DDX39AO00148 AL139246.5-201ENST00000606645 996 ntBASIC25.56■■□□□ 1.68
DDX39AO00148 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX39AO00148 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.56■■□□□ 1.68
DDX39AO00148 AC004812.2-201ENST00000611079 2094 ntBASIC25.56■■□□□ 1.68
DDX39AO00148 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
DDX39AO00148 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
DDX39AO00148 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
DDX39AO00148 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.55■■□□□ 1.68
DDX39AO00148 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX39AO00148 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX39AO00148 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
DDX39AO00148 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX39AO00148 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX39AO00148 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX39AO00148 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX39AO00148 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX39AO00148 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
DDX39AO00148 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.54■■□□□ 1.68
DDX39AO00148 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.54■■□□□ 1.68
DDX39AO00148 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX39AO00148 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX39AO00148 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX39AO00148 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
DDX39AO00148 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX39AO00148 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX39AO00148 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.53■■□□□ 1.68
DDX39AO00148 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.53■■□□□ 1.68
DDX39AO00148 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX39AO00148 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX39AO00148 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX39AO00148 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX39AO00148 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX39AO00148 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
DDX39AO00148 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
DDX39AO00148 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX39AO00148 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX39AO00148 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
DDX39AO00148 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
DDX39AO00148 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX39AO00148 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX39AO00148 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX39AO00148 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX39AO00148 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX39AO00148 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX39AO00148 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX39AO00148 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
DDX39AO00148 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX39AO00148 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX39AO00148 UNC93B3-201ENST00000308076 687 ntBASIC25.5■■□□□ 1.67
DDX39AO00148 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX39AO00148 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX39AO00148 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX39AO00148 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX39AO00148 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX39AO00148 ABCB10P4-201ENST00000566803 2184 ntBASIC25.5■■□□□ 1.67
DDX39AO00148 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX39AO00148 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.5■■□□□ 1.67
DDX39AO00148 AC141586.4-201ENST00000624558 1573 ntBASIC25.5■■□□□ 1.67
DDX39AO00148 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
DDX39AO00148 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX39AO00148 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX39AO00148 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX39AO00148 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX39AO00148 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
DDX39AO00148 MIR638-201ENST00000385237 100 ntBASIC25.49■■□□□ 1.67
DDX39AO00148 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX39AO00148 AC099791.2-201ENST00000605725 427 ntBASIC25.49■■□□□ 1.67
DDX39AO00148 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
DDX39AO00148 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
DDX39AO00148 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX39AO00148 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX39AO00148 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
DDX39AO00148 C17orf82-201ENST00000623772 1530 ntBASIC25.48■■□□□ 1.67
DDX39AO00148 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX39AO00148 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
DDX39AO00148 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX39AO00148 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.47■■□□□ 1.67
DDX39AO00148 PBX2P1-201ENST00000493219 1291 ntBASIC25.47■■□□□ 1.67
DDX39AO00148 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX39AO00148 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX39AO00148 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms