Protein–RNA interactions for Protein: A0A0A6YYG9

ARPC4-TTLL3, Protein ARPC4-TTLL3, humanhuman

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-TTLL3A0A0A6YYG9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 AL161729.1-201ENST00000604104 1402 ntBASIC20.25■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.25■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 AC092028.1-203ENST00000608262 953 ntBASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.23■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.21■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.21■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.83
ARPC4-TTLL3A0A0A6YYG9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 ABCB10P4-201ENST00000566803 2184 ntBASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 SNX5-217ENST00000606557 1087 ntBASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.17■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.16■□□□□ 0.82
ARPC4-TTLL3A0A0A6YYG9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms