Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV1A0A0A0MS02 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.38■□□□□ 0.21
TRGV1A0A0A0MS02 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 ALDH1A3-203ENST00000557963 1670 ntBASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV1A0A0A0MS02 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRGV1A0A0A0MS02 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 BX664725.1-201ENST00000438252 379 ntBASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRGV1A0A0A0MS02 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 AC004448.1-201ENST00000458332 883 ntBASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 RARRES2P1-201ENST00000474487 481 ntBASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRGV1A0A0A0MS02 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRGV1A0A0A0MS02 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRGV1A0A0A0MS02 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRGV1A0A0A0MS02 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRGV1A0A0A0MS02 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRGV1A0A0A0MS02 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRGV1A0A0A0MS02 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV1A0A0A0MS02 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms