Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 AC022413.1-201ENST00000624602 984 ntBASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 AC137767.1-201ENST00000602918 1920 ntBASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
TMEM56-RWDD3S4R434 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM56-RWDD3S4R434 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM56-RWDD3S4R434 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM56-RWDD3S4R434 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM56-RWDD3S4R434 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56-RWDD3S4R434 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM56-RWDD3S4R434 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56-RWDD3S4R434 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56-RWDD3S4R434 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMEM56-RWDD3S4R434 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.58■□□□□ 0.57
TMEM56-RWDD3S4R434 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM56-RWDD3S4R434 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM56-RWDD3S4R434 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM56-RWDD3S4R434 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms