Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RCL1Q9Y2P8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCL1Q9Y2P8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCL1Q9Y2P8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCL1Q9Y2P8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCL1Q9Y2P8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCL1Q9Y2P8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RCL1Q9Y2P8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCL1Q9Y2P8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 AL024507.2-201ENST00000606070 2574 ntBASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCL1Q9Y2P8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.53■□□□□ 0.56
RCL1Q9Y2P8 AC007375.3-201ENST00000600936 2314 ntBASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 CR559946.2-201ENST00000623684 991 ntBASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.52■□□□□ 0.56
RCL1Q9Y2P8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.52■□□□□ 0.55
RCL1Q9Y2P8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RCL1Q9Y2P8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RCL1Q9Y2P8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RCL1Q9Y2P8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.52■□□□□ 0.55
RCL1Q9Y2P8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RCL1Q9Y2P8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms