Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 AC008267.7-201ENST00000624570 1194 ntBASIC25.56■■□□□ 1.68
RNF216Q9NWF9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF216Q9NWF9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF216Q9NWF9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.55■■□□□ 1.68
RNF216Q9NWF9 MIR638-201ENST00000385237 100 ntBASIC25.54■■□□□ 1.68
RNF216Q9NWF9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF216Q9NWF9 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF216Q9NWF9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.54■■□□□ 1.68
RNF216Q9NWF9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF216Q9NWF9 AC022211.4-201ENST00000625094 2161 ntBASIC25.54■■□□□ 1.68
RNF216Q9NWF9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF216Q9NWF9 AL139125.2-201ENST00000623134 1869 ntBASIC25.53■■□□□ 1.68
RNF216Q9NWF9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF216Q9NWF9 AF131216.4-201ENST00000638924 1588 ntBASIC25.52■■□□□ 1.68
RNF216Q9NWF9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.68
RNF216Q9NWF9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
RNF216Q9NWF9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
RNF216Q9NWF9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF216Q9NWF9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF216Q9NWF9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF216Q9NWF9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF216Q9NWF9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
RNF216Q9NWF9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF216Q9NWF9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.5■■□□□ 1.67
RNF216Q9NWF9 AC090877.2-201ENST00000558441 1738 ntBASIC25.5■■□□□ 1.67
RNF216Q9NWF9 AC133561.1-201ENST00000568600 2415 ntBASIC25.5■■□□□ 1.67
RNF216Q9NWF9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 ADAM3B-201ENST00000569937 840 ntBASIC25.49■■□□□ 1.67
RNF216Q9NWF9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 MIR6722-201ENST00000617286 78 ntBASIC25.49■■□□□ 1.67
RNF216Q9NWF9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF216Q9NWF9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 HNRNPA1P23-201ENST00000491091 1133 ntBASIC25.48■■□□□ 1.67
RNF216Q9NWF9 AL136370.1-201ENST00000608166 691 ntBASIC25.48■■□□□ 1.67
RNF216Q9NWF9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF216Q9NWF9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.47■■□□□ 1.67
RNF216Q9NWF9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms