Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 MIR4787-201ENST00000607364 84 ntBASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 AC092028.1-203ENST00000608262 953 ntBASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 AL035685.1-201ENST00000636663 812 ntBASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
BLOC1S4Q9NUP1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BLOC1S4Q9NUP1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BLOC1S4Q9NUP1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
BLOC1S4Q9NUP1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BLOC1S4Q9NUP1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BLOC1S4Q9NUP1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
BLOC1S4Q9NUP1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 KRT125P-201ENST00000546827 989 ntBASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
BLOC1S4Q9NUP1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.44■■□□□ 1.66
BLOC1S4Q9NUP1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
BLOC1S4Q9NUP1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.43■■□□□ 1.66
BLOC1S4Q9NUP1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.43■■□□□ 1.66
BLOC1S4Q9NUP1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BLOC1S4Q9NUP1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
BLOC1S4Q9NUP1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.43■■□□□ 1.66
BLOC1S4Q9NUP1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
BLOC1S4Q9NUP1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
BLOC1S4Q9NUP1 MIR6722-201ENST00000617286 78 ntBASIC25.42■■□□□ 1.66
BLOC1S4Q9NUP1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.42■■□□□ 1.66
BLOC1S4Q9NUP1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BLOC1S4Q9NUP1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.4■■□□□ 1.66
BLOC1S4Q9NUP1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
BLOC1S4Q9NUP1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.39■■□□□ 1.66
BLOC1S4Q9NUP1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
BLOC1S4Q9NUP1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
BLOC1S4Q9NUP1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.39■■□□□ 1.65
BLOC1S4Q9NUP1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
BLOC1S4Q9NUP1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.37■■□□□ 1.65
BLOC1S4Q9NUP1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms