Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NSUN3Q9H649 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.3■■□□□ 1.48
NSUN3Q9H649 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
NSUN3Q9H649 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NSUN3Q9H649 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
NSUN3Q9H649 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.29■■□□□ 1.48
NSUN3Q9H649 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.29■■□□□ 1.48
NSUN3Q9H649 MIR3181-201ENST00000578512 73 ntBASIC24.29■■□□□ 1.48
NSUN3Q9H649 AC009086.3-201ENST00000623486 1008 ntBASIC24.29■■□□□ 1.48
NSUN3Q9H649 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NSUN3Q9H649 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NSUN3Q9H649 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.28■■□□□ 1.48
NSUN3Q9H649 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NSUN3Q9H649 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L2-201ENST00000561772 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.28■■□□□ 1.48
NSUN3Q9H649 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L6-201ENST00000626483 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L1-201ENST00000627662 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L8-201ENST00000629013 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L3-201ENST00000630187 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L7-201ENST00000630678 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 DUX4L5-201ENST00000630834 1275 ntBASIC24.28■■□□□ 1.48
NSUN3Q9H649 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NSUN3Q9H649 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NSUN3Q9H649 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.28■■□□□ 1.48
NSUN3Q9H649 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NSUN3Q9H649 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NSUN3Q9H649 ID1-201ENST00000376105 1233 ntBASIC24.27■■□□□ 1.48
NSUN3Q9H649 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NSUN3Q9H649 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 AC126544.1-201ENST00000580842 1059 ntBASIC24.27■■□□□ 1.48
NSUN3Q9H649 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
NSUN3Q9H649 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NSUN3Q9H649 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NSUN3Q9H649 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NSUN3Q9H649 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NSUN3Q9H649 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.26■■□□□ 1.47
NSUN3Q9H649 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NSUN3Q9H649 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.26■■□□□ 1.47
NSUN3Q9H649 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NSUN3Q9H649 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.26■■□□□ 1.47
NSUN3Q9H649 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NSUN3Q9H649 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
NSUN3Q9H649 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NSUN3Q9H649 AC004911.1-201ENST00000416316 871 ntBASIC24.25■■□□□ 1.47
NSUN3Q9H649 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.25■■□□□ 1.47
NSUN3Q9H649 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NSUN3Q9H649 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NSUN3Q9H649 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.24■■□□□ 1.47
NSUN3Q9H649 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.24■■□□□ 1.47
NSUN3Q9H649 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.24■■□□□ 1.47
NSUN3Q9H649 ERN1-208ENST00000606895 2068 ntBASIC24.23■■□□□ 1.47
NSUN3Q9H649 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.23■■□□□ 1.47
NSUN3Q9H649 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
NSUN3Q9H649 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.23■■□□□ 1.47
NSUN3Q9H649 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
NSUN3Q9H649 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NSUN3Q9H649 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NSUN3Q9H649 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
NSUN3Q9H649 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
NSUN3Q9H649 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.22■■□□□ 1.47
NSUN3Q9H649 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NSUN3Q9H649 TSPY26P-201ENST00000476365 1326 ntBASIC24.22■■□□□ 1.47
NSUN3Q9H649 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
NSUN3Q9H649 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.22■■□□□ 1.47
NSUN3Q9H649 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.22■■□□□ 1.47
NSUN3Q9H649 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NSUN3Q9H649 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NSUN3Q9H649 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NSUN3Q9H649 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 AL358852.1-201ENST00000623174 1268 ntBASIC24.21■■□□□ 1.47
NSUN3Q9H649 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
NSUN3Q9H649 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
NSUN3Q9H649 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
NSUN3Q9H649 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
NSUN3Q9H649 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
NSUN3Q9H649 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.2■■□□□ 1.46
NSUN3Q9H649 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.2■■□□□ 1.46
NSUN3Q9H649 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
NSUN3Q9H649 AC027612.3-201ENST00000413684 1047 ntBASIC24.2■■□□□ 1.46
NSUN3Q9H649 AC123595.1-201ENST00000440769 1046 ntBASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms