Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCX3BQ9H321 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCX3BQ9H321 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCX3BQ9H321 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCX3BQ9H321 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCX3BQ9H321 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VCX3BQ9H321 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCX3BQ9H321 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.67■■□□□ 1.06
VCX3BQ9H321 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VCX3BQ9H321 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.66■■□□□ 1.06
VCX3BQ9H321 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCX3BQ9H321 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.66■■□□□ 1.06
VCX3BQ9H321 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCX3BQ9H321 AC242852.2-201ENST00000615738 1807 ntBASIC21.66■■□□□ 1.06
VCX3BQ9H321 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VCX3BQ9H321 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.66■■□□□ 1.06
VCX3BQ9H321 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VCX3BQ9H321 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VCX3BQ9H321 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
VCX3BQ9H321 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
VCX3BQ9H321 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCX3BQ9H321 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VCX3BQ9H321 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.64■■□□□ 1.06
VCX3BQ9H321 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VCX3BQ9H321 AL137060.1-201ENST00000618151 2648 ntBASIC21.64■■□□□ 1.06
VCX3BQ9H321 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
VCX3BQ9H321 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCX3BQ9H321 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VCX3BQ9H321 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCX3BQ9H321 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
VCX3BQ9H321 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCX3BQ9H321 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VCX3BQ9H321 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VCX3BQ9H321 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
VCX3BQ9H321 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.64■■□□□ 1.05
VCX3BQ9H321 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.63■■□□□ 1.05
VCX3BQ9H321 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.63■■□□□ 1.05
VCX3BQ9H321 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
VCX3BQ9H321 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VCX3BQ9H321 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
VCX3BQ9H321 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
VCX3BQ9H321 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.62■■□□□ 1.05
VCX3BQ9H321 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
VCX3BQ9H321 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VCX3BQ9H321 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
VCX3BQ9H321 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
VCX3BQ9H321 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VCX3BQ9H321 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.61■■□□□ 1.05
VCX3BQ9H321 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
VCX3BQ9H321 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
VCX3BQ9H321 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCX3BQ9H321 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCX3BQ9H321 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VCX3BQ9H321 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VCX3BQ9H321 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
VCX3BQ9H321 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.6■■□□□ 1.05
VCX3BQ9H321 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VCX3BQ9H321 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VCX3BQ9H321 RNF165-205ENST00000588679 2904 ntBASIC21.6■■□□□ 1.05
VCX3BQ9H321 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VCX3BQ9H321 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
VCX3BQ9H321 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
VCX3BQ9H321 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.59■■□□□ 1.05
VCX3BQ9H321 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VCX3BQ9H321 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VCX3BQ9H321 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms