Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.47■□□□□ 0.71
PTX4Q96A99 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTX4Q96A99 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTX4Q96A99 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTX4Q96A99 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTX4Q96A99 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTX4Q96A99 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTX4Q96A99 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTX4Q96A99 AL592295.1-201ENST00000400984 884 ntBASIC19.46■□□□□ 0.71
PTX4Q96A99 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.46■□□□□ 0.71
PTX4Q96A99 AC137767.1-201ENST00000602918 1920 ntBASIC19.46■□□□□ 0.71
PTX4Q96A99 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTX4Q96A99 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 AL022069.1-201ENST00000568025 1636 ntBASIC19.45■□□□□ 0.7
PTX4Q96A99 RPS2P7-201ENST00000447334 885 ntBASIC19.45■□□□□ 0.7
PTX4Q96A99 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.45■□□□□ 0.7
PTX4Q96A99 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.45■□□□□ 0.7
PTX4Q96A99 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PTX4Q96A99 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTX4Q96A99 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTX4Q96A99 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PTX4Q96A99 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.45■□□□□ 0.7
PTX4Q96A99 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTX4Q96A99 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTX4Q96A99 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTX4Q96A99 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTX4Q96A99 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTX4Q96A99 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTX4Q96A99 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.44■□□□□ 0.7
PTX4Q96A99 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTX4Q96A99 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.44■□□□□ 0.7
PTX4Q96A99 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTX4Q96A99 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTX4Q96A99 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 ESRRAP2-201ENST00000418437 1549 ntBASIC19.43■□□□□ 0.7
PTX4Q96A99 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.43■□□□□ 0.7
PTX4Q96A99 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTX4Q96A99 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.43■□□□□ 0.7
PTX4Q96A99 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTX4Q96A99 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.43■□□□□ 0.7
PTX4Q96A99 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTX4Q96A99 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
PTX4Q96A99 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
PTX4Q96A99 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX4Q96A99 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTX4Q96A99 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTX4Q96A99 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX4Q96A99 GPX1-201ENST00000419349 1106 ntBASIC19.42■□□□□ 0.7
PTX4Q96A99 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTX4Q96A99 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTX4Q96A99 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX4Q96A99 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTX4Q96A99 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX4Q96A99 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX4Q96A99 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX4Q96A99 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.41■□□□□ 0.7
PTX4Q96A99 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX4Q96A99 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX4Q96A99 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTX4Q96A99 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
PTX4Q96A99 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX4Q96A99 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.4■□□□□ 0.7
PTX4Q96A99 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.4■□□□□ 0.7
PTX4Q96A99 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX4Q96A99 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTX4Q96A99 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PTX4Q96A99 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.39■□□□□ 0.69
PTX4Q96A99 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms