Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.56■□□□□ 0.72
AP3S2P59780 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
AP3S2P59780 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S2P59780 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3S2P59780 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3S2P59780 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AP3S2P59780 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S2P59780 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S2P59780 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S2P59780 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.55■□□□□ 0.72
AP3S2P59780 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S2P59780 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S2P59780 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
AP3S2P59780 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
AP3S2P59780 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.54■□□□□ 0.72
AP3S2P59780 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S2P59780 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S2P59780 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S2P59780 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S2P59780 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.53■□□□□ 0.72
AP3S2P59780 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S2P59780 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.53■□□□□ 0.72
AP3S2P59780 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
AP3S2P59780 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
AP3S2P59780 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S2P59780 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S2P59780 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.52■□□□□ 0.72
AP3S2P59780 AC007375.3-201ENST00000600936 2314 ntBASIC19.52■□□□□ 0.72
AP3S2P59780 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3S2P59780 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3S2P59780 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.52■□□□□ 0.72
AP3S2P59780 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3S2P59780 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
AP3S2P59780 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
AP3S2P59780 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
AP3S2P59780 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
AP3S2P59780 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 AC242852.2-201ENST00000615738 1807 ntBASIC19.51■□□□□ 0.71
AP3S2P59780 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
AP3S2P59780 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
AP3S2P59780 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
AP3S2P59780 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S2P59780 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.51■□□□□ 0.71
AP3S2P59780 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
AP3S2P59780 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
AP3S2P59780 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S2P59780 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.49■□□□□ 0.71
AP3S2P59780 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
AP3S2P59780 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.49■□□□□ 0.71
AP3S2P59780 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3S2P59780 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3S2P59780 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3S2P59780 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3S2P59780 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3S2P59780 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3S2P59780 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.48■□□□□ 0.71
AP3S2P59780 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3S2P59780 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.48■□□□□ 0.71
AP3S2P59780 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3S2P59780 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3S2P59780 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3S2P59780 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
AP3S2P59780 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3S2P59780 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3S2P59780 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L13-201ENST00000554103 1267 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L15-201ENST00000611059 1267 ntBASIC19.47■□□□□ 0.71
AP3S2P59780 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3S2P59780 DUX4L23-201ENST00000615195 1269 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms