Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.98■□□□□ 0.31
CMC4P56277 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.98■□□□□ 0.31
CMC4P56277 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.98■□□□□ 0.31
CMC4P56277 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMC4P56277 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.98■□□□□ 0.31
CMC4P56277 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CMC4P56277 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CMC4P56277 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.98■□□□□ 0.31
CMC4P56277 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.97■□□□□ 0.31
CMC4P56277 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CMC4P56277 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMC4P56277 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.97■□□□□ 0.31
CMC4P56277 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.97■□□□□ 0.31
CMC4P56277 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CMC4P56277 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CMC4P56277 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMC4P56277 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CMC4P56277 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CMC4P56277 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CMC4P56277 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CMC4P56277 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.96■□□□□ 0.31
CMC4P56277 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.96■□□□□ 0.31
CMC4P56277 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.96■□□□□ 0.31
CMC4P56277 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.96■□□□□ 0.31
CMC4P56277 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CMC4P56277 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CMC4P56277 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.95■□□□□ 0.3
CMC4P56277 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CMC4P56277 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CMC4P56277 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CMC4P56277 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.95■□□□□ 0.3
CMC4P56277 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.94■□□□□ 0.3
CMC4P56277 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CMC4P56277 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CMC4P56277 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CMC4P56277 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CMC4P56277 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CMC4P56277 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CMC4P56277 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CMC4P56277 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CMC4P56277 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CMC4P56277 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CMC4P56277 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CMC4P56277 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 MIR3621-201ENST00000580529 85 ntBASIC16.93■□□□□ 0.3
CMC4P56277 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.93■□□□□ 0.3
CMC4P56277 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.93■□□□□ 0.3
CMC4P56277 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CMC4P56277 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.93■□□□□ 0.3
CMC4P56277 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CMC4P56277 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CMC4P56277 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.92■□□□□ 0.3
CMC4P56277 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CMC4P56277 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CMC4P56277 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CMC4P56277 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CMC4P56277 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CMC4P56277 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.91■□□□□ 0.3
CMC4P56277 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.91■□□□□ 0.3
CMC4P56277 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.91■□□□□ 0.3
CMC4P56277 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CMC4P56277 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.91■□□□□ 0.3
CMC4P56277 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.91■□□□□ 0.3
CMC4P56277 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.91■□□□□ 0.3
CMC4P56277 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.9■□□□□ 0.3
CMC4P56277 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.9■□□□□ 0.3
CMC4P56277 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMC4P56277 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms