Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOX30O94993 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SOX30O94993 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SOX30O94993 Z92544.1-202ENST00000571933 1220 ntBASIC21.14■□□□□ 0.97
SOX30O94993 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.14■□□□□ 0.97
SOX30O94993 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SOX30O94993 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
SOX30O94993 AC133561.1-201ENST00000568600 2415 ntBASIC21.14■□□□□ 0.97
SOX30O94993 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
SOX30O94993 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.13■□□□□ 0.97
SOX30O94993 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.13■□□□□ 0.97
SOX30O94993 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.13■□□□□ 0.97
SOX30O94993 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.13■□□□□ 0.97
SOX30O94993 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SOX30O94993 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SOX30O94993 AC021242.3-201ENST00000607598 1377 ntBASIC21.12■□□□□ 0.97
SOX30O94993 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.12■□□□□ 0.97
SOX30O94993 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.12■□□□□ 0.97
SOX30O94993 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SOX30O94993 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SOX30O94993 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.11■□□□□ 0.97
SOX30O94993 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 MIR6722-201ENST00000617286 78 ntBASIC21.11■□□□□ 0.97
SOX30O94993 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SOX30O94993 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SOX30O94993 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SOX30O94993 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
SOX30O94993 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX30O94993 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.1■□□□□ 0.97
SOX30O94993 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.1■□□□□ 0.97
SOX30O94993 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.1■□□□□ 0.97
SOX30O94993 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.1■□□□□ 0.97
SOX30O94993 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX30O94993 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SOX30O94993 SNX5-217ENST00000606557 1087 ntBASIC21.1■□□□□ 0.97
SOX30O94993 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SOX30O94993 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.1■□□□□ 0.97
SOX30O94993 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SOX30O94993 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
SOX30O94993 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.09■□□□□ 0.97
SOX30O94993 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOX30O94993 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOX30O94993 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOX30O94993 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SOX30O94993 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SOX30O94993 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOX30O94993 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOX30O94993 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SOX30O94993 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOX30O94993 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SOX30O94993 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SOX30O94993 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SOX30O94993 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SOX30O94993 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SOX30O94993 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX30O94993 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SOX30O94993 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX30O94993 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SOX30O94993 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SOX30O94993 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SOX30O94993 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX30O94993 KRT125P-201ENST00000546827 989 ntBASIC21.07■□□□□ 0.96
SOX30O94993 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.07■□□□□ 0.96
SOX30O94993 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOX30O94993 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SOX30O94993 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SOX30O94993 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SOX30O94993 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.06■□□□□ 0.96
SOX30O94993 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.06■□□□□ 0.96
SOX30O94993 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOX30O94993 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms