Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
OPHN1O60890 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.64■■□□□ 1.38
OPHN1O60890 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
OPHN1O60890 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
OPHN1O60890 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
OPHN1O60890 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.64■■□□□ 1.37
OPHN1O60890 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.64■■□□□ 1.37
OPHN1O60890 AC011551.1-201ENST00000614101 683 ntBASIC23.64■■□□□ 1.37
OPHN1O60890 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.64■■□□□ 1.37
OPHN1O60890 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.64■■□□□ 1.37
OPHN1O60890 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
OPHN1O60890 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
OPHN1O60890 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
OPHN1O60890 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
OPHN1O60890 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
OPHN1O60890 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
OPHN1O60890 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
OPHN1O60890 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.63■■□□□ 1.37
OPHN1O60890 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
OPHN1O60890 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.63■■□□□ 1.37
OPHN1O60890 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
OPHN1O60890 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.63■■□□□ 1.37
OPHN1O60890 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
OPHN1O60890 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
OPHN1O60890 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.62■■□□□ 1.37
OPHN1O60890 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.62■■□□□ 1.37
OPHN1O60890 AC120024.1-201ENST00000562672 995 ntBASIC23.62■■□□□ 1.37
OPHN1O60890 AC092028.1-203ENST00000608262 953 ntBASIC23.62■■□□□ 1.37
OPHN1O60890 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
OPHN1O60890 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
OPHN1O60890 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
OPHN1O60890 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
OPHN1O60890 AC131281.2-201ENST00000520478 145 ntBASIC23.61■■□□□ 1.37
OPHN1O60890 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.61■■□□□ 1.37
OPHN1O60890 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
OPHN1O60890 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
OPHN1O60890 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
OPHN1O60890 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
OPHN1O60890 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.6■■□□□ 1.37
OPHN1O60890 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
OPHN1O60890 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
OPHN1O60890 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.6■■□□□ 1.37
OPHN1O60890 AL136116.3-201ENST00000402907 1138 ntBASIC23.6■■□□□ 1.37
OPHN1O60890 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.6■■□□□ 1.37
OPHN1O60890 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.6■■□□□ 1.37
OPHN1O60890 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
OPHN1O60890 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
OPHN1O60890 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
OPHN1O60890 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
OPHN1O60890 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
OPHN1O60890 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
OPHN1O60890 ABCB10P4-201ENST00000566803 2184 ntBASIC23.59■■□□□ 1.37
OPHN1O60890 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
OPHN1O60890 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
OPHN1O60890 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.59■■□□□ 1.37
OPHN1O60890 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.59■■□□□ 1.37
OPHN1O60890 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
OPHN1O60890 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
OPHN1O60890 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.58■■□□□ 1.37
OPHN1O60890 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
OPHN1O60890 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
OPHN1O60890 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
OPHN1O60890 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
OPHN1O60890 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
OPHN1O60890 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
OPHN1O60890 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
OPHN1O60890 AL161729.1-201ENST00000604104 1402 ntBASIC23.58■■□□□ 1.36
OPHN1O60890 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.57■■□□□ 1.36
OPHN1O60890 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
OPHN1O60890 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
OPHN1O60890 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
OPHN1O60890 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
OPHN1O60890 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.57■■□□□ 1.36
OPHN1O60890 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
OPHN1O60890 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.57■■□□□ 1.36
OPHN1O60890 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.57■■□□□ 1.36
OPHN1O60890 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.57■■□□□ 1.36
OPHN1O60890 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
OPHN1O60890 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
OPHN1O60890 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
OPHN1O60890 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
OPHN1O60890 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.56■■□□□ 1.36
OPHN1O60890 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
OPHN1O60890 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.56■■□□□ 1.36
OPHN1O60890 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.56■■□□□ 1.36
OPHN1O60890 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
OPHN1O60890 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
OPHN1O60890 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
OPHN1O60890 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.55■■□□□ 1.36
OPHN1O60890 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.55■■□□□ 1.36
OPHN1O60890 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
OPHN1O60890 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
OPHN1O60890 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms