Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 CRIP2-210ENST00000551836 627 ntTSL 327.3■■□□□ 1.965e-7■■■■■ 39.5
DKC1O60832 CRIP2-204ENST00000547643 1373 ntTSL 325.44■■□□□ 1.665e-7■■■■■ 39.5
DKC1O60832 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.48■■□□□ 1.195e-7■■■■■ 39.5
DKC1O60832 CRIP2-203ENST00000538259 991 ntTSL 221.33■■□□□ 1.015e-7■■■■■ 39.5
DKC1O60832 CRIP2-207ENST00000548989 1976 ntTSL 220.5■□□□□ 0.875e-7■■■■■ 39.5
DKC1O60832 CRIP2-205ENST00000548309 1893 ntTSL 1 (best)20.48■□□□□ 0.875e-7■■■■■ 39.5
DKC1O60832 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.59■□□□□ 0.575e-7■■■■■ 39.5
DKC1O60832 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.485e-7■■■■■ 39.5
DKC1O60832 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.465e-7■■■■■ 39.5
DKC1O60832 MINK1-209ENST00000574453 4941 ntTSL 1 (best)17.75■□□□□ 0.435e-7■■■■■ 39.5
DKC1O60832 CRIP2-206ENST00000548923 582 ntTSL 317.42■□□□□ 0.385e-7■■■■■ 39.5
DKC1O60832 MINK1-207ENST00000572330 5299 ntTSL 517.34■□□□□ 0.375e-7■■■■■ 39.5
DKC1O60832 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.265e-7■■■■■ 39.5
DKC1O60832 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.075e-7■■■■■ 39.5
DKC1O60832 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.295e-7■■■■■ 39.5
DKC1O60832 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.295e-7■■■■■ 39.5
DKC1O60832 CRIP2-208ENST00000550577 817 ntTSL 212.9□□□□□ -0.345e-7■■■■■ 39.5
DKC1O60832 ZNF236-203ENST00000543926 8206 ntTSL 1 (best)12.14□□□□□ -0.475e-7■■■■■ 39.5
DKC1O60832 MIB1-204ENST00000578646 3306 ntTSL 211.88□□□□□ -0.515e-7■■■■■ 39.5
DKC1O60832 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.625e-7■■■■■ 39.5
DKC1O60832 MINK1-213ENST00000577021 675 ntTSL 511.03□□□□□ -0.645e-7■■■■■ 39.5
DKC1O60832 TUBGCP3-203ENST00000462580 915 ntTSL 36.86□□□□□ -1.315e-7■■■■■ 39.5
DKC1O60832 SNORA51.1-201ENST00000363243 140 ntBASIC6.18□□□□□ -1.425e-7■■■■■ 39.5
DKC1O60832 SNORA73.1-201ENST00000363107 205 ntBASIC5.55□□□□□ -1.525e-7■■■■■ 39.5
DKC1O60832 MIB1-203ENST00000578260 544 ntTSL 45.24□□□□□ -1.575e-7■■■■■ 39.5
DKC1O60832 MIB1-202ENST00000577749 726 ntTSL 53.31□□□□□ -1.885e-7■■■■■ 39.5
DKC1O60832 THOC2-206ENST00000433883 876 ntTSL 53.29□□□□□ -1.885e-7■■■■■ 39.5
DKC1O60832 SNORA26.4-201ENST00000391188 123 ntBASIC-1.7□□□□□ -2.685e-7■■■■■ 39.5
DKC1O60832 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.3■■□□□ 1.961e-9■■■■■ 39.4
DKC1O60832 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)24.47■■□□□ 1.511e-9■■■■■ 39.4
DKC1O60832 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.71e-9■■■■■ 39.4
DKC1O60832 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.431e-9■■■■■ 39.4
DKC1O60832 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.271e-9■■■■■ 39.4
DKC1O60832 EIPR1-207ENST00000444776 594 ntTSL 419.1■□□□□ 0.655e-7■■■■■ 39.4
DKC1O60832 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.35■□□□□ 0.371e-6■■■■■ 39.3
DKC1O60832 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.4■□□□□ 0.221e-6■■■■■ 39.3
DKC1O60832 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.24■□□□□ 0.031e-6■■■■■ 39.3
DKC1O60832 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC13.48□□□□□ -0.251e-6■■■■■ 39.3
DKC1O60832 SHANK2-205ENST00000412252 1376 ntTSL 513.41□□□□□ -0.261e-6■■■■■ 39.3
DKC1O60832 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.99□□□□□ -0.331e-6■■■■■ 39.3
DKC1O60832 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.69□□□□□ -0.381e-6■■■■■ 39.3
DKC1O60832 NUMBL-208ENST00000599594 393 ntTSL 527.31■■□□□ 1.962e-6■■■■■ 39.3
DKC1O60832 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.822e-6■■■■■ 39.3
DKC1O60832 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.812e-6■■■■■ 39.3
DKC1O60832 NUMBL-204ENST00000595741 559 ntTSL 419.1■□□□□ 0.652e-6■■■■■ 39.3
DKC1O60832 NUMBL-210ENST00000600636 555 ntTSL 418.06■□□□□ 0.482e-6■■■■■ 39.3
DKC1O60832 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.232e-6■■■■■ 39.3
DKC1O60832 WDR27-211ENST00000546525 3511 ntTSL 1 (best)12.89□□□□□ -0.353e-7■■■■■ 39.2
DKC1O60832 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.87■□□□□ 0.937e-7■■■■■ 39.2
DKC1O60832 LDLRAD4-206ENST00000586207 545 ntTSL 419.45■□□□□ 0.72e-8■■■■■ 39.2
DKC1O60832 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.613e-10■■■■■ 39.2
DKC1O60832 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.453e-10■■■■■ 39.2
DKC1O60832 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.447e-7■■■■■ 39.2
DKC1O60832 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.38■□□□□ 0.217e-7■■■■■ 39.2
DKC1O60832 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.04■□□□□ 0.167e-7■■■■■ 39.2
DKC1O60832 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16■□□□□ 0.157e-7■■■■■ 39.2
DKC1O60832 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.29■□□□□ 0.047e-7■■■■■ 39.2
DKC1O60832 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.023e-10■■■■■ 39.2
DKC1O60832 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.083e-10■■■■■ 39.2
DKC1O60832 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.083e-10■■■■■ 39.2
DKC1O60832 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.17e-7■■■■■ 39.2
DKC1O60832 LDLRAD4-219ENST00000593236 572 ntTSL 414.3□□□□□ -0.122e-8■■■■■ 39.2
DKC1O60832 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.133e-10■■■■■ 39.2
DKC1O60832 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.227e-7■■■■■ 39.2
DKC1O60832 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.07■□□□□ 01e-323■■■■■ 39.2
DKC1O60832 CCT6P3-203ENST00000452026 1383 ntBASIC12.87□□□□□ -0.351e-323■■■■■ 39.2
DKC1O60832 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC12.72□□□□□ -0.371e-323■■■■■ 39.2
DKC1O60832 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.231e-323■■■■■ 39.2
DKC1O60832 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.752e-6■■■■■ 39
DKC1O60832 ADCY9-204ENST00000572288 772 ntTSL 414.58□□□□□ -0.082e-6■■■■■ 39
DKC1O60832 ADCY9-202ENST00000571467 569 ntTSL 514.25□□□□□ -0.132e-6■■■■■ 39
DKC1O60832 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.584e-8■■■■■ 39
DKC1O60832 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.21■□□□□ 0.514e-8■■■■■ 39
DKC1O60832 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.344e-8■■■■■ 39
DKC1O60832 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.174e-8■■■■■ 39
DKC1O60832 TBRG4-209ENST00000478532 945 ntTSL 514.53□□□□□ -0.084e-8■■■■■ 39
DKC1O60832 TBRG4-217ENST00000495973 3409 ntTSL 1 (best)11.98□□□□□ -0.494e-8■■■■■ 39
DKC1O60832 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.1■■□□□ 1.616e-7■■■■■ 38.8
DKC1O60832 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.076e-7■■■■■ 38.8
DKC1O60832 KCNIP2-205ENST00000355657 2617 ntTSL 221.34■■□□□ 1.016e-7■■■■■ 38.8
DKC1O60832 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.9■□□□□ 0.626e-7■■■■■ 38.8
DKC1O60832 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC10.46□□□□□ -0.736e-7■■■■■ 38.8
DKC1O60832 KCNIP2-201ENST00000239117 555 ntTSL 1 (best)10.32□□□□□ -0.766e-7■■■■■ 38.8
DKC1O60832 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.996e-7■■■■■ 38.8
DKC1O60832 KCNIP2-212ENST00000472764 847 ntTSL 58.33□□□□□ -1.086e-7■■■■■ 38.8
DKC1O60832 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.6□□□□□ -1.196e-7■■■■■ 38.8
DKC1O60832 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.95□□□□□ -1.146e-48■■■■■ 38.8
DKC1O60832 TBRG4-214ENST00000488222 972 ntTSL 319.32■□□□□ 0.681e-323■■■■■ 38.8
DKC1O60832 TBRG4-213ENST00000484326 835 ntTSL 217.4■□□□□ 0.381e-323■■■■■ 38.8
DKC1O60832 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.451e-7■■■■■ 38.7
DKC1O60832 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.321e-7■■■■■ 38.7
DKC1O60832 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.221e-7■■■■■ 38.7
DKC1O60832 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.131e-7■■■■■ 38.7
DKC1O60832 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.731e-7■■■■■ 38.7
DKC1O60832 CUX1-220ENST00000607092 559 ntTSL 37.1□□□□□ -1.272e-7■■■■■ 38.7
DKC1O60832 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.17■□□□□ 0.026e-7■■■■■ 38.7
DKC1O60832 PON2-212ENST00000490778 694 ntTSL 525.84■■□□□ 1.731e-8■■■■■ 38.6
DKC1O60832 GNB1-207ENST00000472614 708 ntTSL 225.71■■□□□ 1.711e-8■■■■■ 38.6
DKC1O60832 PON2-204ENST00000455123 1515 ntTSL 1 (best)25.53■■□□□ 1.681e-8■■■■■ 38.6
DKC1O60832 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.3■■□□□ 1.641e-8■■■■■ 38.6
Retrieved 100 of 8,567 protein–RNA pairs in 128.3 ms