RNA–Protein interactions for RNA: ENST00000253159.12

ZNF236-201, Transcript of zinc finger protein 236, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF236, Length 8,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF236-201ENST00000253159 DCAF8L2P0C7V8 631 aa16.51■□□□□ 0.23
ZNF236-201ENST00000253159 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
ZNF236-201ENST00000253159 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
ZNF236-201ENST00000253159 APLP2Q06481 763 aa15.25■□□□□ 0.03
ZNF236-201ENST00000253159 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
ZNF236-201ENST00000253159 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
ZNF236-201ENST00000253159 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
ZNF236-201ENST00000253159 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
ZNF236-201ENST00000253159 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
ZNF236-201ENST00000253159 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.12
ZNF236-201ENST00000253159 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
ZNF236-201ENST00000253159 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
ZNF236-201ENST00000253159 MYT1Q01538 1121 aa14.22□□□□□ -0.13
ZNF236-201ENST00000253159 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.13
ZNF236-201ENST00000253159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
ZNF236-201ENST00000253159 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
ZNF236-201ENST00000253159 ABCC9O60706 1549 aa14.09□□□□□ -0.15
ZNF236-201ENST00000253159 ZEB1P37275 1124 aaPredicted RBP14.08□□□□□ -0.16
ZNF236-201ENST00000253159 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
ZNF236-201ENST00000253159 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
ZNF236-201ENST00000253159 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
ZNF236-201ENST00000253159 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
ZNF236-201ENST00000253159 RANGAP1P46060 587 aaPredicted RBP13.91□□□□□ -0.18
ZNF236-201ENST00000253159 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
ZNF236-201ENST00000253159 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
ZNF236-201ENST00000253159 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
ZNF236-201ENST00000253159 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
ZNF236-201ENST00000253159 NEFLP07196 543 aa13.8□□□□□ -0.2
ZNF236-201ENST00000253159 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
ZNF236-201ENST00000253159 NEFMP07197 916 aa13.71□□□□□ -0.22
ZNF236-201ENST00000253159 FBLN2P98095 1184 aa13.7□□□□□ -0.22
ZNF236-201ENST00000253159 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
ZNF236-201ENST00000253159 ACIN1Q9UKV3 1341 aaKnown RBP13.67□□□□□ -0.22
ZNF236-201ENST00000253159 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
ZNF236-201ENST00000253159 NACADO15069 1562 aa13.59□□□□□ -0.23
ZNF236-201ENST00000253159 BCANQ96GW7 911 aa13.58□□□□□ -0.23
ZNF236-201ENST00000253159 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
ZNF236-201ENST00000253159 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
ZNF236-201ENST00000253159 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
ZNF236-201ENST00000253159 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
ZNF236-201ENST00000253159 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
ZNF236-201ENST00000253159 SCRIBQ14160 1630 aa13.44□□□□□ -0.26
ZNF236-201ENST00000253159 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
ZNF236-201ENST00000253159 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
ZNF236-201ENST00000253159 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
ZNF236-201ENST00000253159 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
ZNF236-201ENST00000253159 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
ZNF236-201ENST00000253159 ITGAEP38570 1179 aa13.33□□□□□ -0.28
ZNF236-201ENST00000253159 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
ZNF236-201ENST00000253159 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
ZNF236-201ENST00000253159 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
ZNF236-201ENST00000253159 TSPY4P0CV99 314 aa13.21□□□□□ -0.3
ZNF236-201ENST00000253159 TSPY10P0CW01 314 aa13.21□□□□□ -0.3
ZNF236-201ENST00000253159 CLSPNQ9HAW4 1339 aa13.18□□□□□ -0.3
ZNF236-201ENST00000253159 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
ZNF236-201ENST00000253159 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
ZNF236-201ENST00000253159 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
ZNF236-201ENST00000253159 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
ZNF236-201ENST00000253159 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
ZNF236-201ENST00000253159 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
ZNF236-201ENST00000253159 ARID4BQ4LE39 1312 aaPredicted RBP13.1□□□□□ -0.31
ZNF236-201ENST00000253159 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
ZNF236-201ENST00000253159 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
ZNF236-201ENST00000253159 PLEKHD1A6NEE1 506 aa13.09□□□□□ -0.31
ZNF236-201ENST00000253159 EEA1Q15075 1411 aa13.09□□□□□ -0.31
ZNF236-201ENST00000253159 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
ZNF236-201ENST00000253159 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.32
ZNF236-201ENST00000253159 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
ZNF236-201ENST00000253159 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
ZNF236-201ENST00000253159 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
ZNF236-201ENST00000253159 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
ZNF236-201ENST00000253159 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
ZNF236-201ENST00000253159 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
ZNF236-201ENST00000253159 BAZ1AQ9NRL2 1556 aaPredicted RBP13.02□□□□□ -0.32
ZNF236-201ENST00000253159 FOXD1Q16676 465 aa13.01□□□□□ -0.33
ZNF236-201ENST00000253159 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
ZNF236-201ENST00000253159 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.333e-7■■■■■ 30.4
ZNF236-201ENST00000253159 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
ZNF236-201ENST00000253159 MTUS2Q5JR59 1369 aa12.99□□□□□ -0.33
ZNF236-201ENST00000253159 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
ZNF236-201ENST00000253159 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
ZNF236-201ENST00000253159 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
ZNF236-201ENST00000253159 CLIP1P30622 1438 aa12.97□□□□□ -0.33
ZNF236-201ENST00000253159 ANP32CO43423 234 aa12.97□□□□□ -0.33
ZNF236-201ENST00000253159 KANK1Q14678 1352 aa12.97□□□□□ -0.33
ZNF236-201ENST00000253159 CARMIL2Q6F5E8 1435 aa12.97□□□□□ -0.33
ZNF236-201ENST00000253159 KIF27Q86VH2 1401 aa12.95□□□□□ -0.34
ZNF236-201ENST00000253159 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
ZNF236-201ENST00000253159 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
ZNF236-201ENST00000253159 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
ZNF236-201ENST00000253159 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
ZNF236-201ENST00000253159 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
ZNF236-201ENST00000253159 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
ZNF236-201ENST00000253159 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
ZNF236-201ENST00000253159 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
ZNF236-201ENST00000253159 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
ZNF236-201ENST00000253159 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
ZNF236-201ENST00000253159 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
ZNF236-201ENST00000253159 CEP162Q5TB80 1403 aa12.85□□□□□ -0.35
ZNF236-201ENST00000253159 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms