RNA–Protein interactions for RNA: ENST00000361278.7

TBRG4-202, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best) BASIC

Gene TBRG4, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-202ENST00000361278 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
TBRG4-202ENST00000361278 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
TBRG4-202ENST00000361278 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.76
TBRG4-202ENST00000361278 ABCC9O60706 1549 aa32.22■■■□□ 2.75
TBRG4-202ENST00000361278 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
TBRG4-202ENST00000361278 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.68
TBRG4-202ENST00000361278 MYO15BQ96JP2 1530 aa31.48■■■□□ 2.63
TBRG4-202ENST00000361278 NACADO15069 1562 aa31.44■■■□□ 2.62
TBRG4-202ENST00000361278 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
TBRG4-202ENST00000361278 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
TBRG4-202ENST00000361278 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
TBRG4-202ENST00000361278 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
TBRG4-202ENST00000361278 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.457e-9■□□□□ 8.5
TBRG4-202ENST00000361278 BICRAQ9NZM4 1560 aa30.3■■■□□ 2.44
TBRG4-202ENST00000361278 SUPT5HO00267 1087 aaKnown RBP30.06■■■□□ 2.4
TBRG4-202ENST00000361278 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
TBRG4-202ENST00000361278 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
TBRG4-202ENST00000361278 MROH2BQ7Z745 1585 aa29.76■■■□□ 2.35
TBRG4-202ENST00000361278 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
TBRG4-202ENST00000361278 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
TBRG4-202ENST00000361278 WIZO95785 1651 aa29.52■■■□□ 2.32
TBRG4-202ENST00000361278 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.3
TBRG4-202ENST00000361278 ATAD2BQ9ULI0 1458 aa29.25■■■□□ 2.27
TBRG4-202ENST00000361278 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
TBRG4-202ENST00000361278 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
TBRG4-202ENST00000361278 TOP2AP11388 1531 aaKnown RBP29.16■■■□□ 2.26
TBRG4-202ENST00000361278 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
TBRG4-202ENST00000361278 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
TBRG4-202ENST00000361278 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
TBRG4-202ENST00000361278 HMGXB3Q12766 1538 aa28.94■■■□□ 2.22
TBRG4-202ENST00000361278 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
TBRG4-202ENST00000361278 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
TBRG4-202ENST00000361278 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
TBRG4-202ENST00000361278 CFTRP13569 1480 aa28.31■■■□□ 2.12
TBRG4-202ENST00000361278 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
TBRG4-202ENST00000361278 TRIM41Q8WV44 630 aa28.25■■■□□ 2.11
TBRG4-202ENST00000361278 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
TBRG4-202ENST00000361278 NESP48681 1621 aa28.18■■■□□ 2.1
TBRG4-202ENST00000361278 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
TBRG4-202ENST00000361278 LAMC3Q9Y6N6 1575 aa28.1■■■□□ 2.09
TBRG4-202ENST00000361278 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
TBRG4-202ENST00000361278 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
TBRG4-202ENST00000361278 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
TBRG4-202ENST00000361278 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
TBRG4-202ENST00000361278 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
TBRG4-202ENST00000361278 CUX1P39880 1505 aa27.84■■■□□ 2.05
TBRG4-202ENST00000361278 TOP2BQ02880 1626 aa27.82■■■□□ 2.04
TBRG4-202ENST00000361278 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
TBRG4-202ENST00000361278 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
TBRG4-202ENST00000361278 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
TBRG4-202ENST00000361278 ERCC6Q03468 1493 aa27.67■■■□□ 2.02
TBRG4-202ENST00000361278 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
TBRG4-202ENST00000361278 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
TBRG4-202ENST00000361278 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
TBRG4-202ENST00000361278 SOGA1O94964 1423 aa27.64■■■□□ 2.02
TBRG4-202ENST00000361278 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
TBRG4-202ENST00000361278 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
TBRG4-202ENST00000361278 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
TBRG4-202ENST00000361278 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
TBRG4-202ENST00000361278 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
TBRG4-202ENST00000361278 EEA1Q15075 1411 aa27.47■■□□□ 1.99
TBRG4-202ENST00000361278 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
TBRG4-202ENST00000361278 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
TBRG4-202ENST00000361278 CSRNP3Q8WYN3 585 aa27.42■■□□□ 1.98
TBRG4-202ENST00000361278 WDR62O43379 1518 aa27.4■■□□□ 1.98
TBRG4-202ENST00000361278 CUX2O14529 1486 aa27.39■■□□□ 1.98
TBRG4-202ENST00000361278 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.97
TBRG4-202ENST00000361278 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
TBRG4-202ENST00000361278 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
TBRG4-202ENST00000361278 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
TBRG4-202ENST00000361278 TDRD9Q8NDG6 1382 aaKnown RBP27.23■■□□□ 1.95
TBRG4-202ENST00000361278 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
TBRG4-202ENST00000361278 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
TBRG4-202ENST00000361278 IGF1RP08069 1367 aa27.15■■□□□ 1.94
TBRG4-202ENST00000361278 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
TBRG4-202ENST00000361278 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
TBRG4-202ENST00000361278 KIF21BO75037 1637 aa27.12■■□□□ 1.93
TBRG4-202ENST00000361278 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
TBRG4-202ENST00000361278 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
TBRG4-202ENST00000361278 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.934e-7■■■■■ 35.7
TBRG4-202ENST00000361278 ZNF608Q9ULD9 1512 aaPredicted RBP27.08■■□□□ 1.93
TBRG4-202ENST00000361278 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
TBRG4-202ENST00000361278 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
TBRG4-202ENST00000361278 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
TBRG4-202ENST00000361278 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
TBRG4-202ENST00000361278 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
TBRG4-202ENST00000361278 TNIKQ9UKE5 1360 aa26.96■■□□□ 1.91
TBRG4-202ENST00000361278 EIF4G3O43432 1585 aaKnown RBP26.96■■□□□ 1.91
TBRG4-202ENST00000361278 CUL7Q14999 1698 aa26.94■■□□□ 1.9
TBRG4-202ENST00000361278 GRIN2BQ13224 1484 aa26.94■■□□□ 1.9
TBRG4-202ENST00000361278 RANGAP1P46060 587 aaPredicted RBP26.84■■□□□ 1.89
TBRG4-202ENST00000361278 CEP162Q5TB80 1403 aa26.83■■□□□ 1.89
TBRG4-202ENST00000361278 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
TBRG4-202ENST00000361278 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
TBRG4-202ENST00000361278 ADAMTS12P58397 1594 aa26.79■■□□□ 1.88
TBRG4-202ENST00000361278 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
TBRG4-202ENST00000361278 FBLN2P98095 1184 aa26.7■■□□□ 1.86
TBRG4-202ENST00000361278 CLIP1P30622 1438 aa26.7■■□□□ 1.86
TBRG4-202ENST00000361278 CHMP7Q8WUX9 453 aaPredicted RBP26.68■■□□□ 1.86
TBRG4-202ENST00000361278 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms