RNA–Protein interactions for RNA: ENST00000258770.7

TBRG4-201, Transcript of transforming growth factor beta regulator 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBRG4, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-201ENST00000258770 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
TBRG4-201ENST00000258770 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.52
TBRG4-201ENST00000258770 ZCCHC6Q5VYS8 1495 aaKnown RBP29.73■■■□□ 2.35
TBRG4-201ENST00000258770 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
TBRG4-201ENST00000258770 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
TBRG4-201ENST00000258770 ABCC9O60706 1549 aa29.16■■■□□ 2.26
TBRG4-201ENST00000258770 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
TBRG4-201ENST00000258770 MYO15BQ96JP2 1530 aa28.78■■■□□ 2.2
TBRG4-201ENST00000258770 NACADO15069 1562 aa28.63■■■□□ 2.17
TBRG4-201ENST00000258770 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
TBRG4-201ENST00000258770 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
TBRG4-201ENST00000258770 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
TBRG4-201ENST00000258770 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
TBRG4-201ENST00000258770 BICRAQ9NZM4 1560 aa27.62■■■□□ 2.01
TBRG4-201ENST00000258770 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
TBRG4-201ENST00000258770 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 27e-9■□□□□ 8.5
TBRG4-201ENST00000258770 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
TBRG4-201ENST00000258770 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
TBRG4-201ENST00000258770 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
TBRG4-201ENST00000258770 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
TBRG4-201ENST00000258770 WIZO95785 1651 aa27.17■■□□□ 1.94
TBRG4-201ENST00000258770 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
TBRG4-201ENST00000258770 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
TBRG4-201ENST00000258770 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
TBRG4-201ENST00000258770 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
TBRG4-201ENST00000258770 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
TBRG4-201ENST00000258770 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
TBRG4-201ENST00000258770 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
TBRG4-201ENST00000258770 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
TBRG4-201ENST00000258770 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
TBRG4-201ENST00000258770 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
TBRG4-201ENST00000258770 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
TBRG4-201ENST00000258770 TRIM41Q8WV44 630 aa26.15■■□□□ 1.78
TBRG4-201ENST00000258770 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
TBRG4-201ENST00000258770 CFTRP13569 1480 aa25.9■■□□□ 1.74
TBRG4-201ENST00000258770 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
TBRG4-201ENST00000258770 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
TBRG4-201ENST00000258770 DNAJC5BQ9UF47 199 aa25.8■■□□□ 1.72
TBRG4-201ENST00000258770 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
TBRG4-201ENST00000258770 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
TBRG4-201ENST00000258770 FAM9AQ8IZU1 332 aaPredicted RBP25.77■■□□□ 1.72
TBRG4-201ENST00000258770 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
TBRG4-201ENST00000258770 NESP48681 1621 aa25.64■■□□□ 1.7
TBRG4-201ENST00000258770 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
TBRG4-201ENST00000258770 SOGA1O94964 1423 aa25.6■■□□□ 1.69
TBRG4-201ENST00000258770 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
TBRG4-201ENST00000258770 CUX1P39880 1505 aa25.58■■□□□ 1.69
TBRG4-201ENST00000258770 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
TBRG4-201ENST00000258770 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
TBRG4-201ENST00000258770 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
TBRG4-201ENST00000258770 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
TBRG4-201ENST00000258770 EEA1Q15075 1411 aa25.42■■□□□ 1.66
TBRG4-201ENST00000258770 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
TBRG4-201ENST00000258770 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
TBRG4-201ENST00000258770 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
TBRG4-201ENST00000258770 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
TBRG4-201ENST00000258770 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
TBRG4-201ENST00000258770 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
TBRG4-201ENST00000258770 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
TBRG4-201ENST00000258770 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
TBRG4-201ENST00000258770 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
TBRG4-201ENST00000258770 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
TBRG4-201ENST00000258770 KIF21BO75037 1637 aa25.15■■□□□ 1.62
TBRG4-201ENST00000258770 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
TBRG4-201ENST00000258770 CUX2O14529 1486 aa25.12■■□□□ 1.61
TBRG4-201ENST00000258770 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
TBRG4-201ENST00000258770 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
TBRG4-201ENST00000258770 PCGF6Q9BYE7 350 aa25.05■■□□□ 1.6
TBRG4-201ENST00000258770 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
TBRG4-201ENST00000258770 UBTFP17480 764 aaKnown RBP25.04■■□□□ 1.6
TBRG4-201ENST00000258770 PRXQ9BXM0 1461 aa25.03■■□□□ 1.6
TBRG4-201ENST00000258770 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
TBRG4-201ENST00000258770 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
TBRG4-201ENST00000258770 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
TBRG4-201ENST00000258770 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
TBRG4-201ENST00000258770 IGF1RP08069 1367 aa24.96■■□□□ 1.59
TBRG4-201ENST00000258770 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
TBRG4-201ENST00000258770 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
TBRG4-201ENST00000258770 WDR62O43379 1518 aa24.9■■□□□ 1.58
TBRG4-201ENST00000258770 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.58
TBRG4-201ENST00000258770 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
TBRG4-201ENST00000258770 TDRD9Q8NDG6 1382 aaKnown RBP24.85■■□□□ 1.57
TBRG4-201ENST00000258770 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
TBRG4-201ENST00000258770 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
TBRG4-201ENST00000258770 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
TBRG4-201ENST00000258770 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
TBRG4-201ENST00000258770 CLIP1P30622 1438 aa24.75■■□□□ 1.55
TBRG4-201ENST00000258770 CUL7Q14999 1698 aa24.73■■□□□ 1.55
TBRG4-201ENST00000258770 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
TBRG4-201ENST00000258770 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
TBRG4-201ENST00000258770 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
TBRG4-201ENST00000258770 AQRO60306 1485 aaKnown RBP eCLIP24.68■■□□□ 1.544e-7■■■■■ 35.7
TBRG4-201ENST00000258770 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
TBRG4-201ENST00000258770 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
TBRG4-201ENST00000258770 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
TBRG4-201ENST00000258770 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
TBRG4-201ENST00000258770 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
TBRG4-201ENST00000258770 VPS8Q8N3P4 1428 aa24.53■■□□□ 1.52
TBRG4-201ENST00000258770 HRCP23327 699 aa24.53■■□□□ 1.52
TBRG4-201ENST00000258770 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms