RNA–Protein interactions for RNA: ENST00000494076.5

TBRG4-215, Transcript of transforming growth factor beta regulator 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TBRG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-215ENST00000494076 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
TBRG4-215ENST00000494076 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
TBRG4-215ENST00000494076 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
TBRG4-215ENST00000494076 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
TBRG4-215ENST00000494076 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
TBRG4-215ENST00000494076 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
TBRG4-215ENST00000494076 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
TBRG4-215ENST00000494076 ABCC9O60706 1549 aa25.76■■□□□ 1.71
TBRG4-215ENST00000494076 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
TBRG4-215ENST00000494076 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
TBRG4-215ENST00000494076 NACADO15069 1562 aa25.42■■□□□ 1.66
TBRG4-215ENST00000494076 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
TBRG4-215ENST00000494076 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
TBRG4-215ENST00000494076 HRCP23327 699 aa25.1■■□□□ 1.61
TBRG4-215ENST00000494076 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
TBRG4-215ENST00000494076 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
TBRG4-215ENST00000494076 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
TBRG4-215ENST00000494076 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
TBRG4-215ENST00000494076 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
TBRG4-215ENST00000494076 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
TBRG4-215ENST00000494076 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
TBRG4-215ENST00000494076 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
TBRG4-215ENST00000494076 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
TBRG4-215ENST00000494076 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
TBRG4-215ENST00000494076 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.497e-9■□□□□ 8.5
TBRG4-215ENST00000494076 BAZ1AQ9NRL2 1556 aaPredicted RBP24.27■■□□□ 1.48
TBRG4-215ENST00000494076 WIZO95785 1651 aa24.16■■□□□ 1.46
TBRG4-215ENST00000494076 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
TBRG4-215ENST00000494076 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
TBRG4-215ENST00000494076 ZEB1P37275 1124 aaPredicted RBP24.06■■□□□ 1.44
TBRG4-215ENST00000494076 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
TBRG4-215ENST00000494076 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
TBRG4-215ENST00000494076 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.4
TBRG4-215ENST00000494076 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
TBRG4-215ENST00000494076 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
TBRG4-215ENST00000494076 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
TBRG4-215ENST00000494076 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
TBRG4-215ENST00000494076 ABCC8Q09428 1581 aa23.64■■□□□ 1.37
TBRG4-215ENST00000494076 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
TBRG4-215ENST00000494076 WRNQ14191 1432 aaPredicted RBP eCLIP23.53■■□□□ 1.36
TBRG4-215ENST00000494076 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
TBRG4-215ENST00000494076 EEA1Q15075 1411 aa23.46■■□□□ 1.35
TBRG4-215ENST00000494076 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
TBRG4-215ENST00000494076 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
TBRG4-215ENST00000494076 TNIKQ9UKE5 1360 aa23.42■■□□□ 1.34
TBRG4-215ENST00000494076 SOGA1O94964 1423 aa23.42■■□□□ 1.34
TBRG4-215ENST00000494076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
TBRG4-215ENST00000494076 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
TBRG4-215ENST00000494076 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
TBRG4-215ENST00000494076 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
TBRG4-215ENST00000494076 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
TBRG4-215ENST00000494076 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
TBRG4-215ENST00000494076 SCAF1Q9H7N4 1312 aaKnown RBP23.18■■□□□ 1.3
TBRG4-215ENST00000494076 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
TBRG4-215ENST00000494076 KIF21BO75037 1637 aa23.15■■□□□ 1.3
TBRG4-215ENST00000494076 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
TBRG4-215ENST00000494076 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
TBRG4-215ENST00000494076 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
TBRG4-215ENST00000494076 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
TBRG4-215ENST00000494076 CFTRP13569 1480 aa23.01■■□□□ 1.27
TBRG4-215ENST00000494076 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
TBRG4-215ENST00000494076 CLIP1P30622 1438 aa22.97■■□□□ 1.27
TBRG4-215ENST00000494076 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
TBRG4-215ENST00000494076 VPS8Q8N3P4 1428 aa22.92■■□□□ 1.26
TBRG4-215ENST00000494076 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
TBRG4-215ENST00000494076 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
TBRG4-215ENST00000494076 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
TBRG4-215ENST00000494076 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
TBRG4-215ENST00000494076 NEUROD1Q13562 356 aa22.86■■□□□ 1.25
TBRG4-215ENST00000494076 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
TBRG4-215ENST00000494076 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
TBRG4-215ENST00000494076 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
TBRG4-215ENST00000494076 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
TBRG4-215ENST00000494076 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
TBRG4-215ENST00000494076 CUX1P39880 1505 aa22.74■■□□□ 1.23
TBRG4-215ENST00000494076 APLP2Q06481 763 aa22.74■■□□□ 1.23
TBRG4-215ENST00000494076 DNAJC5BQ9UF47 199 aa22.69■■□□□ 1.22
TBRG4-215ENST00000494076 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
TBRG4-215ENST00000494076 NESP48681 1621 aa22.67■■□□□ 1.22
TBRG4-215ENST00000494076 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
TBRG4-215ENST00000494076 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
TBRG4-215ENST00000494076 GTF3C3Q9Y5Q9 886 aa22.64■■□□□ 1.21
TBRG4-215ENST00000494076 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
TBRG4-215ENST00000494076 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
TBRG4-215ENST00000494076 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
TBRG4-215ENST00000494076 CLSPNQ9HAW4 1339 aa22.51■■□□□ 1.19
TBRG4-215ENST00000494076 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
TBRG4-215ENST00000494076 MIER1Q8N108 512 aa22.47■■□□□ 1.19
TBRG4-215ENST00000494076 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
TBRG4-215ENST00000494076 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
TBRG4-215ENST00000494076 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
TBRG4-215ENST00000494076 RRBP1Q9P2E9 1410 aaKnown RBP22.43■■□□□ 1.18
TBRG4-215ENST00000494076 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
TBRG4-215ENST00000494076 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
TBRG4-215ENST00000494076 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.17
TBRG4-215ENST00000494076 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
TBRG4-215ENST00000494076 ARHGAP35Q9NRY4 1499 aa22.37■■□□□ 1.17
TBRG4-215ENST00000494076 CUX2O14529 1486 aa22.36■■□□□ 1.17
TBRG4-215ENST00000494076 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
TBRG4-215ENST00000494076 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms