Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FCF1Q9Y324 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FCF1Q9Y324 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FCF1Q9Y324 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.28■■□□□ 1.32
FCF1Q9Y324 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.28■■□□□ 1.32
FCF1Q9Y324 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
FCF1Q9Y324 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
FCF1Q9Y324 AL161729.1-201ENST00000604104 1402 ntBASIC23.27■■□□□ 1.32
FCF1Q9Y324 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FCF1Q9Y324 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
FCF1Q9Y324 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.27■■□□□ 1.32
FCF1Q9Y324 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.27■■□□□ 1.32
FCF1Q9Y324 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.27■■□□□ 1.32
FCF1Q9Y324 MIR3621-201ENST00000580529 85 ntBASIC23.27■■□□□ 1.32
FCF1Q9Y324 AL356740.2-201ENST00000601559 647 ntBASIC23.27■■□□□ 1.32
FCF1Q9Y324 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FCF1Q9Y324 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
FCF1Q9Y324 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.26■■□□□ 1.31
FCF1Q9Y324 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FCF1Q9Y324 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FCF1Q9Y324 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FCF1Q9Y324 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FCF1Q9Y324 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
FCF1Q9Y324 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FCF1Q9Y324 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FCF1Q9Y324 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.25■■□□□ 1.31
FCF1Q9Y324 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FCF1Q9Y324 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FCF1Q9Y324 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FCF1Q9Y324 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 AC005703.6-201ENST00000623265 1329 ntBASIC23.24■■□□□ 1.31
FCF1Q9Y324 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.24■■□□□ 1.31
FCF1Q9Y324 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FCF1Q9Y324 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.23■■□□□ 1.31
FCF1Q9Y324 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.23■■□□□ 1.31
FCF1Q9Y324 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FCF1Q9Y324 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.22■■□□□ 1.31
FCF1Q9Y324 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.22■■□□□ 1.31
FCF1Q9Y324 AC131281.2-201ENST00000520478 145 ntBASIC23.22■■□□□ 1.31
FCF1Q9Y324 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.22■■□□□ 1.31
FCF1Q9Y324 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.22■■□□□ 1.31
FCF1Q9Y324 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FCF1Q9Y324 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FCF1Q9Y324 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FCF1Q9Y324 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.21■■□□□ 1.31
FCF1Q9Y324 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FCF1Q9Y324 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FCF1Q9Y324 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FCF1Q9Y324 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
FCF1Q9Y324 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FCF1Q9Y324 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FCF1Q9Y324 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FCF1Q9Y324 AC008406.3-201ENST00000620001 1374 ntBASIC23.2■■□□□ 1.3
FCF1Q9Y324 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
FCF1Q9Y324 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.2■■□□□ 1.3
FCF1Q9Y324 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.2■■□□□ 1.3
FCF1Q9Y324 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FCF1Q9Y324 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 LINC00543-201ENST00000567234 1845 ntBASIC23.19■■□□□ 1.3
FCF1Q9Y324 ALDH1A3-203ENST00000557963 1670 ntBASIC23.19■■□□□ 1.3
FCF1Q9Y324 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
FCF1Q9Y324 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.19■■□□□ 1.3
FCF1Q9Y324 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.19■■□□□ 1.3
FCF1Q9Y324 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.19■■□□□ 1.3
FCF1Q9Y324 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.19■■□□□ 1.3
FCF1Q9Y324 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
FCF1Q9Y324 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FCF1Q9Y324 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms