Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VCX3BQ9H321 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 DUSP8P3-201ENST00000399571 1760 ntBASIC21.79■■□□□ 1.08
VCX3BQ9H321 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
VCX3BQ9H321 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCX3BQ9H321 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCX3BQ9H321 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VCX3BQ9H321 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCX3BQ9H321 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.78■■□□□ 1.08
VCX3BQ9H321 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VCX3BQ9H321 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VCX3BQ9H321 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VCX3BQ9H321 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VCX3BQ9H321 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VCX3BQ9H321 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VCX3BQ9H321 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VCX3BQ9H321 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
VCX3BQ9H321 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
VCX3BQ9H321 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VCX3BQ9H321 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VCX3BQ9H321 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VCX3BQ9H321 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VCX3BQ9H321 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VCX3BQ9H321 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.76■■□□□ 1.07
VCX3BQ9H321 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.76■■□□□ 1.07
VCX3BQ9H321 HLA-L-211ENST00000482052 1765 ntBASIC21.76■■□□□ 1.07
VCX3BQ9H321 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.76■■□□□ 1.07
VCX3BQ9H321 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCX3BQ9H321 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VCX3BQ9H321 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.75■■□□□ 1.07
VCX3BQ9H321 AC005559.1-201ENST00000589661 871 ntBASIC21.75■■□□□ 1.07
VCX3BQ9H321 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.75■■□□□ 1.07
VCX3BQ9H321 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
VCX3BQ9H321 ANOS2P-203ENST00000472227 1816 ntBASIC21.75■■□□□ 1.07
VCX3BQ9H321 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VCX3BQ9H321 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VCX3BQ9H321 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VCX3BQ9H321 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCX3BQ9H321 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCX3BQ9H321 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VCX3BQ9H321 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.74■■□□□ 1.07
VCX3BQ9H321 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCX3BQ9H321 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VCX3BQ9H321 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VCX3BQ9H321 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCX3BQ9H321 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VCX3BQ9H321 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.74■■□□□ 1.07
VCX3BQ9H321 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VCX3BQ9H321 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCX3BQ9H321 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.73■■□□□ 1.07
VCX3BQ9H321 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCX3BQ9H321 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCX3BQ9H321 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
VCX3BQ9H321 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCX3BQ9H321 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
VCX3BQ9H321 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VCX3BQ9H321 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.73■■□□□ 1.07
VCX3BQ9H321 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VCX3BQ9H321 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
VCX3BQ9H321 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCX3BQ9H321 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCX3BQ9H321 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.72■■□□□ 1.07
VCX3BQ9H321 AL359504.2-201ENST00000605506 1601 ntBASIC21.72■■□□□ 1.07
VCX3BQ9H321 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCX3BQ9H321 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.71■■□□□ 1.07
VCX3BQ9H321 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCX3BQ9H321 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCX3BQ9H321 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.71■■□□□ 1.07
VCX3BQ9H321 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCX3BQ9H321 AC092068.2-201ENST00000590491 1708 ntBASIC21.71■■□□□ 1.07
VCX3BQ9H321 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCX3BQ9H321 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCX3BQ9H321 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCX3BQ9H321 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.7■■□□□ 1.06
VCX3BQ9H321 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.7■■□□□ 1.06
VCX3BQ9H321 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
VCX3BQ9H321 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCX3BQ9H321 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCX3BQ9H321 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.69■■□□□ 1.06
VCX3BQ9H321 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.69■■□□□ 1.06
VCX3BQ9H321 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCX3BQ9H321 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
VCX3BQ9H321 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCX3BQ9H321 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
VCX3BQ9H321 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VCX3BQ9H321 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCX3BQ9H321 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VCX3BQ9H321 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms