Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 KRT18P24-201ENST00000344739 1156 ntBASIC20.97■□□□□ 0.95
TRIM2Q9C040 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 PVT1_1.1-201ENST00000615125 194 ntBASIC20.97■□□□□ 0.95
TRIM2Q9C040 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM2Q9C040 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM2Q9C040 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM2Q9C040 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM2Q9C040 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM2Q9C040 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM2Q9C040 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM2Q9C040 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TRIM2Q9C040 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM2Q9C040 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRIM2Q9C040 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM2Q9C040 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM2Q9C040 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM2Q9C040 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM2Q9C040 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TRIM2Q9C040 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM2Q9C040 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM2Q9C040 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM2Q9C040 THA1P-201ENST00000590384 1145 ntBASIC20.94■□□□□ 0.94
TRIM2Q9C040 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM2Q9C040 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM2Q9C040 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM2Q9C040 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM2Q9C040 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM2Q9C040 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM2Q9C040 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM2Q9C040 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM2Q9C040 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 DUSP8P5-201ENST00000422884 1815 ntBASIC20.93■□□□□ 0.94
TRIM2Q9C040 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM2Q9C040 KRT8P33-201ENST00000508125 1423 ntBASIC20.93■□□□□ 0.94
TRIM2Q9C040 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM2Q9C040 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 AC131274.2-201ENST00000580697 1507 ntBASIC20.93■□□□□ 0.94
TRIM2Q9C040 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM2Q9C040 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM2Q9C040 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM2Q9C040 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM2Q9C040 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM2Q9C040 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM2Q9C040 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM2Q9C040 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM2Q9C040 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM2Q9C040 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM2Q9C040 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM2Q9C040 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM2Q9C040 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM2Q9C040 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM2Q9C040 AL451085.2-201ENST00000605085 799 ntBASIC20.91■□□□□ 0.94
TRIM2Q9C040 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM2Q9C040 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM2Q9C040 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM2Q9C040 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM2Q9C040 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM2Q9C040 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM2Q9C040 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM2Q9C040 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM2Q9C040 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM2Q9C040 AC103834.1-201ENST00000520383 144 ntBASIC20.9■□□□□ 0.94
TRIM2Q9C040 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM2Q9C040 MIR4281-201ENST00000580852 62 ntBASIC20.9■□□□□ 0.94
TRIM2Q9C040 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM2Q9C040 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM2Q9C040 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM2Q9C040 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM2Q9C040 YBX1P4-201ENST00000392794 808 ntBASIC20.89■□□□□ 0.93
TRIM2Q9C040 MIR4508-201ENST00000584178 70 ntBASIC20.89■□□□□ 0.93
TRIM2Q9C040 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM2Q9C040 AL035685.1-201ENST00000636663 812 ntBASIC20.89■□□□□ 0.93
TRIM2Q9C040 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM2Q9C040 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms