Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDH15Q96QU1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH15Q96QU1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH15Q96QU1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH15Q96QU1 AC136469.2-201ENST00000623944 1028 ntBASIC22.58■■□□□ 1.21
PCDH15Q96QU1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
PCDH15Q96QU1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDH15Q96QU1 AC034268.1-201ENST00000441047 882 ntBASIC22.58■■□□□ 1.2
PCDH15Q96QU1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDH15Q96QU1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.58■■□□□ 1.2
PCDH15Q96QU1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDH15Q96QU1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDH15Q96QU1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
PCDH15Q96QU1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH15Q96QU1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDH15Q96QU1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH15Q96QU1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH15Q96QU1 IKBKGP1-201ENST00000612193 1073 ntBASIC22.57■■□□□ 1.2
PCDH15Q96QU1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH15Q96QU1 AC009102.2-201ENST00000606772 1639 ntBASIC22.57■■□□□ 1.2
PCDH15Q96QU1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 AC006455.2-201ENST00000429931 906 ntBASIC22.56■■□□□ 1.2
PCDH15Q96QU1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH15Q96QU1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH15Q96QU1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH15Q96QU1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH15Q96QU1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH15Q96QU1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH15Q96QU1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH15Q96QU1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH15Q96QU1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDH15Q96QU1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH15Q96QU1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDH15Q96QU1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH15Q96QU1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDH15Q96QU1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH15Q96QU1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH15Q96QU1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH15Q96QU1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH15Q96QU1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDH15Q96QU1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 RARRES2P11-201ENST00000635158 484 ntBASIC22.52■■□□□ 1.2
PCDH15Q96QU1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 KRT18P5-201ENST00000436075 1291 ntBASIC22.52■■□□□ 1.2
PCDH15Q96QU1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDH15Q96QU1 AL031602.1-201ENST00000633169 911 ntBASIC22.52■■□□□ 1.2
PCDH15Q96QU1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH15Q96QU1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDH15Q96QU1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDH15Q96QU1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
PCDH15Q96QU1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH15Q96QU1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH15Q96QU1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH15Q96QU1 AC241377.3-202ENST00000626088 1088 ntBASIC22.5■■□□□ 1.19
PCDH15Q96QU1 AC241585.3-202ENST00000628937 1088 ntBASIC22.5■■□□□ 1.19
PCDH15Q96QU1 AC245100.8-202ENST00000629247 1058 ntBASIC22.5■■□□□ 1.19
PCDH15Q96QU1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH15Q96QU1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms