Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GCN1Q92616 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.59■□□□□ 0.89
GCN1Q92616 AL138781.1-201ENST00000566567 1274 ntBASIC20.59■□□□□ 0.89
GCN1Q92616 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.59■□□□□ 0.89
GCN1Q92616 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GCN1Q92616 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
GCN1Q92616 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.58■□□□□ 0.89
GCN1Q92616 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.58■□□□□ 0.89
GCN1Q92616 MIR3181-201ENST00000578512 73 ntBASIC20.58■□□□□ 0.89
GCN1Q92616 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.58■□□□□ 0.88
GCN1Q92616 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.58■□□□□ 0.88
GCN1Q92616 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GCN1Q92616 BID-214ENST00000617586 542 ntTSL 5 BASIC20.58■□□□□ 0.88
GCN1Q92616 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCN1Q92616 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GCN1Q92616 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
GCN1Q92616 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.57■□□□□ 0.88
GCN1Q92616 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.57■□□□□ 0.88
GCN1Q92616 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GCN1Q92616 KRT18P29-201ENST00000397031 1267 ntBASIC20.57■□□□□ 0.88
GCN1Q92616 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.57■□□□□ 0.88
GCN1Q92616 AL354811.1-201ENST00000610286 706 ntBASIC20.57■□□□□ 0.88
GCN1Q92616 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GCN1Q92616 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCN1Q92616 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCN1Q92616 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCN1Q92616 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCN1Q92616 AC006455.2-201ENST00000429931 906 ntBASIC20.56■□□□□ 0.88
GCN1Q92616 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.56■□□□□ 0.88
GCN1Q92616 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCN1Q92616 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCN1Q92616 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.56■□□□□ 0.88
GCN1Q92616 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.56■□□□□ 0.88
GCN1Q92616 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCN1Q92616 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.55■□□□□ 0.88
GCN1Q92616 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCN1Q92616 AL596275.1-201ENST00000423464 877 ntBASIC20.55■□□□□ 0.88
GCN1Q92616 AC098590.1-201ENST00000468126 897 ntBASIC20.55■□□□□ 0.88
GCN1Q92616 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.55■□□□□ 0.88
GCN1Q92616 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.55■□□□□ 0.88
GCN1Q92616 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCN1Q92616 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCN1Q92616 POU5F1P3-201ENST00000428824 1078 ntBASIC20.55■□□□□ 0.88
GCN1Q92616 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GCN1Q92616 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.55■□□□□ 0.88
GCN1Q92616 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.55■□□□□ 0.88
GCN1Q92616 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCN1Q92616 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCN1Q92616 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
GCN1Q92616 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GCN1Q92616 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GCN1Q92616 AC010331.1-201ENST00000611423 582 ntBASIC20.54■□□□□ 0.88
GCN1Q92616 AP004607.4-201ENST00000530158 1459 ntBASIC20.54■□□□□ 0.88
GCN1Q92616 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GCN1Q92616 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.54■□□□□ 0.88
GCN1Q92616 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GCN1Q92616 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCN1Q92616 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCN1Q92616 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCN1Q92616 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.53■□□□□ 0.88
GCN1Q92616 AC126544.1-201ENST00000580842 1059 ntBASIC20.53■□□□□ 0.88
GCN1Q92616 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GCN1Q92616 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCN1Q92616 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.53■□□□□ 0.88
GCN1Q92616 ITM2C-210ENST00000620962 501 ntBASIC20.53■□□□□ 0.88
GCN1Q92616 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.53■□□□□ 0.88
GCN1Q92616 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.52■□□□□ 0.88
GCN1Q92616 AC073210.2-201ENST00000430369 194 ntBASIC20.52■□□□□ 0.88
GCN1Q92616 FAM210CP-201ENST00000445714 574 ntBASIC20.52■□□□□ 0.88
GCN1Q92616 AP005435.1-201ENST00000529293 1178 ntBASIC20.52■□□□□ 0.88
GCN1Q92616 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.52■□□□□ 0.88
GCN1Q92616 GCSHP5-201ENST00000443090 522 ntBASIC20.52■□□□□ 0.88
GCN1Q92616 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GCN1Q92616 AC083906.2-201ENST00000511578 360 ntBASIC20.51■□□□□ 0.87
GCN1Q92616 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCN1Q92616 ECEL1P3-201ENST00000427961 737 ntBASIC20.51■□□□□ 0.87
GCN1Q92616 AP006294.2-201ENST00000641667 209 ntBASIC20.51■□□□□ 0.87
GCN1Q92616 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.5■□□□□ 0.87
GCN1Q92616 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCN1Q92616 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.5■□□□□ 0.87
GCN1Q92616 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.5■□□□□ 0.87
GCN1Q92616 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.5■□□□□ 0.87
GCN1Q92616 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.5■□□□□ 0.87
GCN1Q92616 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.5■□□□□ 0.87
GCN1Q92616 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GCN1Q92616 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.5■□□□□ 0.87
GCN1Q92616 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GCN1Q92616 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.49■□□□□ 0.87
GCN1Q92616 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GCN1Q92616 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GCN1Q92616 AC098934.4-201ENST00000564127 592 ntBASIC20.49■□□□□ 0.87
GCN1Q92616 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.49■□□□□ 0.87
GCN1Q92616 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.49■□□□□ 0.87
GCN1Q92616 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCN1Q92616 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GCN1Q92616 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.48■□□□□ 0.87
GCN1Q92616 MIR572-201ENST00000384983 95 ntBASIC20.48■□□□□ 0.87
GCN1Q92616 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GCN1Q92616 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.48■□□□□ 0.87
GCN1Q92616 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms