Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.97■□□□□ 0.47
LINC01006Q8NI28 AC027682.1-201ENST00000562846 899 ntBASIC17.97■□□□□ 0.47
LINC01006Q8NI28 AC104564.3-201ENST00000582367 638 ntBASIC17.97■□□□□ 0.47
LINC01006Q8NI28 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.97■□□□□ 0.47
LINC01006Q8NI28 DUSP8P4-201ENST00000399538 1761 ntBASIC17.96■□□□□ 0.47
LINC01006Q8NI28 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 AC241377.3-202ENST00000626088 1088 ntBASIC17.96■□□□□ 0.47
LINC01006Q8NI28 AC241585.3-202ENST00000628937 1088 ntBASIC17.96■□□□□ 0.47
LINC01006Q8NI28 AC245100.8-202ENST00000629247 1058 ntBASIC17.96■□□□□ 0.47
LINC01006Q8NI28 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01006Q8NI28 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 C17orf82-201ENST00000623772 1530 ntBASIC17.95■□□□□ 0.46
LINC01006Q8NI28 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 AC008764.7-201ENST00000593779 1081 ntBASIC17.95■□□□□ 0.46
LINC01006Q8NI28 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01006Q8NI28 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 MIR6821-201ENST00000617625 74 ntBASIC17.94■□□□□ 0.46
LINC01006Q8NI28 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01006Q8NI28 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LINC01006Q8NI28 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 AC097381.1-201ENST00000429019 1296 ntBASIC17.92■□□□□ 0.46
LINC01006Q8NI28 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01006Q8NI28 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 AC099791.1-201ENST00000416440 715 ntBASIC17.91■□□□□ 0.46
LINC01006Q8NI28 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.91■□□□□ 0.46
LINC01006Q8NI28 AC136469.2-201ENST00000623944 1028 ntBASIC17.91■□□□□ 0.46
LINC01006Q8NI28 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LINC01006Q8NI28 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 IRS3P-201ENST00000223076 1006 ntBASIC17.9■□□□□ 0.46
LINC01006Q8NI28 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01006Q8NI28 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LINC01006Q8NI28 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01006Q8NI28 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms