Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SETD9Q8NE22 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SETD9Q8NE22 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SETD9Q8NE22 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SETD9Q8NE22 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.97■□□□□ 0.95
SETD9Q8NE22 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SETD9Q8NE22 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.97■□□□□ 0.95
SETD9Q8NE22 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SETD9Q8NE22 FOXO3B-201ENST00000395675 1928 ntBASIC20.96■□□□□ 0.95
SETD9Q8NE22 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SETD9Q8NE22 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 DUX4L11-201ENST00000611504 1267 ntBASIC20.96■□□□□ 0.95
SETD9Q8NE22 DUX4L12-201ENST00000614593 1267 ntBASIC20.96■□□□□ 0.95
SETD9Q8NE22 DUX4L14-201ENST00000621227 1267 ntBASIC20.96■□□□□ 0.95
SETD9Q8NE22 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SETD9Q8NE22 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.96■□□□□ 0.95
SETD9Q8NE22 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SETD9Q8NE22 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.95■□□□□ 0.94
SETD9Q8NE22 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SETD9Q8NE22 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SETD9Q8NE22 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SETD9Q8NE22 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SETD9Q8NE22 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SETD9Q8NE22 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SETD9Q8NE22 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SETD9Q8NE22 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.94■□□□□ 0.94
SETD9Q8NE22 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SETD9Q8NE22 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SETD9Q8NE22 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SETD9Q8NE22 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SETD9Q8NE22 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SETD9Q8NE22 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SETD9Q8NE22 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SETD9Q8NE22 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SETD9Q8NE22 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SETD9Q8NE22 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.93■□□□□ 0.94
SETD9Q8NE22 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SETD9Q8NE22 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SETD9Q8NE22 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SETD9Q8NE22 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SETD9Q8NE22 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SETD9Q8NE22 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 AC025884.2-201ENST00000553429 711 ntBASIC20.92■□□□□ 0.94
SETD9Q8NE22 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SETD9Q8NE22 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
SETD9Q8NE22 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.91■□□□□ 0.94
SETD9Q8NE22 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SETD9Q8NE22 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.91■□□□□ 0.94
SETD9Q8NE22 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.91■□□□□ 0.94
SETD9Q8NE22 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SETD9Q8NE22 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.9■□□□□ 0.94
SETD9Q8NE22 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SETD9Q8NE22 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
SETD9Q8NE22 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.9■□□□□ 0.94
SETD9Q8NE22 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SETD9Q8NE22 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms