Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 CLDN5-201ENST00000403084 2357 ntBASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 ECEL1P2-201ENST00000461596 1295 ntBASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 AC016575.1-201ENST00000607026 382 ntBASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC71LQ8N9Z2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 AC092068.2-201ENST00000590491 1708 ntBASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC71LQ8N9Z2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 AL161729.1-201ENST00000604104 1402 ntBASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71LQ8N9Z2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71LQ8N9Z2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 DUSP8P3-201ENST00000399571 1760 ntBASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71LQ8N9Z2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71LQ8N9Z2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC71LQ8N9Z2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC71LQ8N9Z2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC71LQ8N9Z2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71LQ8N9Z2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71LQ8N9Z2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms