Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
VMA21Q3ZAQ7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 KRT18P24-201ENST00000344739 1156 ntBASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VMA21Q3ZAQ7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VMA21Q3ZAQ7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
VMA21Q3ZAQ7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
VMA21Q3ZAQ7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.39■□□□□ 0.54
VMA21Q3ZAQ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 AL033527.3-201ENST00000566366 1196 ntBASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VMA21Q3ZAQ7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 PVT1_1.1-201ENST00000615125 194 ntBASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VMA21Q3ZAQ7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VMA21Q3ZAQ7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 YBX1P4-201ENST00000392794 808 ntBASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 MIR4281-201ENST00000580852 62 ntBASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 MIR4508-201ENST00000584178 70 ntBASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VMA21Q3ZAQ7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VMA21Q3ZAQ7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
VMA21Q3ZAQ7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VMA21Q3ZAQ7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms