Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CDH6P55285 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.79■■□□□ 1.4
CDH6P55285 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH6P55285 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH6P55285 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CDH6P55285 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH6P55285 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH6P55285 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH6P55285 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH6P55285 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH6P55285 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.78■■□□□ 1.4
CDH6P55285 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH6P55285 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH6P55285 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.78■■□□□ 1.4
CDH6P55285 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH6P55285 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.77■■□□□ 1.4
CDH6P55285 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.77■■□□□ 1.4
CDH6P55285 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH6P55285 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH6P55285 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.77■■□□□ 1.4
CDH6P55285 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH6P55285 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDH6P55285 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH6P55285 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH6P55285 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH6P55285 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH6P55285 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDH6P55285 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.76■■□□□ 1.39
CDH6P55285 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH6P55285 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.76■■□□□ 1.39
CDH6P55285 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH6P55285 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH6P55285 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDH6P55285 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH6P55285 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.75■■□□□ 1.39
CDH6P55285 AL031848.2-201ENST00000607670 837 ntBASIC23.75■■□□□ 1.39
CDH6P55285 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH6P55285 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH6P55285 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDH6P55285 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.74■■□□□ 1.39
CDH6P55285 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH6P55285 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDH6P55285 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH6P55285 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CDH6P55285 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.73■■□□□ 1.39
CDH6P55285 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH6P55285 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH6P55285 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH6P55285 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH6P55285 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH6P55285 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CDH6P55285 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
CDH6P55285 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH6P55285 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH6P55285 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH6P55285 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH6P55285 ALDH1A3-203ENST00000557963 1670 ntBASIC23.71■■□□□ 1.39
CDH6P55285 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH6P55285 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH6P55285 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.71■■□□□ 1.39
CDH6P55285 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH6P55285 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDH6P55285 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDH6P55285 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.7■■□□□ 1.39
CDH6P55285 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDH6P55285 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CDH6P55285 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH6P55285 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.7■■□□□ 1.38
CDH6P55285 RARRES2P1-201ENST00000474487 481 ntBASIC23.7■■□□□ 1.38
CDH6P55285 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.7■■□□□ 1.38
CDH6P55285 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.7■■□□□ 1.38
CDH6P55285 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH6P55285 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CDH6P55285 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.7■■□□□ 1.38
CDH6P55285 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDH6P55285 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH6P55285 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH6P55285 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.69■■□□□ 1.38
CDH6P55285 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
CDH6P55285 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms