Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SURF4O15260 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SURF4O15260 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SURF4O15260 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 AC092068.2-201ENST00000590491 1708 ntBASIC20.65■□□□□ 0.9
SURF4O15260 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SURF4O15260 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SURF4O15260 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.65■□□□□ 0.9
SURF4O15260 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SURF4O15260 NTF6A-201ENST00000591175 560 ntBASIC20.65■□□□□ 0.9
SURF4O15260 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.65■□□□□ 0.9
SURF4O15260 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SURF4O15260 AL117328.2-201ENST00000624617 1940 ntBASIC20.65■□□□□ 0.9
SURF4O15260 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SURF4O15260 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SURF4O15260 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SURF4O15260 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.64■□□□□ 0.89
SURF4O15260 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.64■□□□□ 0.89
SURF4O15260 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.64■□□□□ 0.89
SURF4O15260 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SURF4O15260 DUSP8P3-201ENST00000399571 1760 ntBASIC20.64■□□□□ 0.89
SURF4O15260 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SURF4O15260 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SURF4O15260 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SURF4O15260 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SURF4O15260 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SURF4O15260 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.63■□□□□ 0.89
SURF4O15260 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SURF4O15260 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SURF4O15260 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
SURF4O15260 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SURF4O15260 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SURF4O15260 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SURF4O15260 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SURF4O15260 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SURF4O15260 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SURF4O15260 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.62■□□□□ 0.89
SURF4O15260 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
SURF4O15260 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SURF4O15260 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.62■□□□□ 0.89
SURF4O15260 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SURF4O15260 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
SURF4O15260 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
SURF4O15260 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SURF4O15260 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.61■□□□□ 0.89
SURF4O15260 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SURF4O15260 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SURF4O15260 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SURF4O15260 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SURF4O15260 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SURF4O15260 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SURF4O15260 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SURF4O15260 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.6■□□□□ 0.89
SURF4O15260 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SURF4O15260 AL592295.1-201ENST00000400984 884 ntBASIC20.6■□□□□ 0.89
SURF4O15260 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SURF4O15260 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SURF4O15260 AC018755.3-202ENST00000596210 929 ntBASIC20.6■□□□□ 0.89
SURF4O15260 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SURF4O15260 U85056.1-201ENST00000616429 682 ntBASIC20.6■□□□□ 0.89
SURF4O15260 AC233723.2-201ENST00000623798 2106 ntBASIC20.6■□□□□ 0.89
SURF4O15260 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SURF4O15260 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SURF4O15260 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SURF4O15260 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.59■□□□□ 0.89
SURF4O15260 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SURF4O15260 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.59■□□□□ 0.89
SURF4O15260 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SURF4O15260 SPCS2P3-201ENST00000500401 656 ntBASIC20.59■□□□□ 0.89
SURF4O15260 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.59■□□□□ 0.89
SURF4O15260 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SURF4O15260 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.58■□□□□ 0.89
SURF4O15260 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SURF4O15260 AC087393.1-201ENST00000582896 145 ntBASIC20.58■□□□□ 0.89
SURF4O15260 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SURF4O15260 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SURF4O15260 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SURF4O15260 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.58■□□□□ 0.88
SURF4O15260 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SURF4O15260 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SURF4O15260 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
SURF4O15260 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SURF4O15260 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SURF4O15260 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.57■□□□□ 0.88
SURF4O15260 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SURF4O15260 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SURF4O15260 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SURF4O15260 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms