Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-5A0A0J9YX44 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRBV5-5A0A0J9YX44 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
TRBV5-5A0A0J9YX44 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.92■□□□□ 0.78
TRBV5-5A0A0J9YX44 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV5-5A0A0J9YX44 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 C1orf229-201ENST00000623686 2258 ntBASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 AC133552.2-201ENST00000619106 1032 ntBASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV5-5A0A0J9YX44 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 GPX1-201ENST00000419349 1106 ntBASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 EP400NL-214ENST00000641289 2402 ntBASIC19.89■□□□□ 0.77
TRBV5-5A0A0J9YX44 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 AL592295.1-201ENST00000400984 884 ntBASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV5-5A0A0J9YX44 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV5-5A0A0J9YX44 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV5-5A0A0J9YX44 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
TRBV5-5A0A0J9YX44 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 AC087393.1-201ENST00000582896 145 ntBASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV5-5A0A0J9YX44 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms