Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 LRRC75A-AS1-204ENST00000475947 598 ntTSL 29.3□□□□□ -0.928e-16■□□□□ 8.3
RPS3P23396 LRRC75A-AS1-222ENST00000580770 572 ntTSL 49.3□□□□□ -0.928e-16■□□□□ 8.3
RPS3P23396 LRRC75A-AS1-221ENST00000580180 753 ntTSL 28.4□□□□□ -1.068e-16■□□□□ 8.3
RPS3P23396 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.51□□□□□ -1.218e-16■□□□□ 8.3
RPS3P23396 LRRC75A-AS1-230ENST00000584926 604 ntTSL 57.25□□□□□ -1.258e-16■□□□□ 8.3
RPS3P23396 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)6.52□□□□□ -1.378e-16■□□□□ 8.3
RPS3P23396 LRRC75A-AS1-216ENST00000492250 565 ntTSL 54.49□□□□□ -1.698e-16■□□□□ 8.3
RPS3P23396 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.36■■□□□ 1.654e-13■□□□□ 8.3
RPS3P23396 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.31■■□□□ 1.644e-13■□□□□ 8.3
RPS3P23396 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.31■■□□□ 1.644e-13■□□□□ 8.3
RPS3P23396 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.344e-13■□□□□ 8.3
RPS3P23396 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.41■■□□□ 1.344e-13■□□□□ 8.3
RPS3P23396 DCTN2-208ENST00000547480 599 ntTSL 215.67■□□□□ 0.14e-13■□□□□ 8.3
RPS3P23396 DCTN2-217ENST00000550750 567 ntTSL 214.78□□□□□ -0.044e-13■□□□□ 8.3
RPS3P23396 HSPA9-213ENST00000524109 1175 ntTSL 59.86□□□□□ -0.834e-13■□□□□ 8.3
RPS3P23396 DCTN2-218ENST00000550954 892 ntTSL 58.07□□□□□ -1.124e-13■□□□□ 8.3
RPS3P23396 DCTN2-207ENST00000547345 566 ntTSL 26.88□□□□□ -1.314e-13■□□□□ 8.3
RPS3P23396 DCTN2-204ENST00000546670 580 ntTSL 35.85□□□□□ -1.474e-13■□□□□ 8.3
RPS3P23396 DCTN2-203ENST00000546559 471 ntTSL 35.21□□□□□ -1.584e-13■□□□□ 8.3
RPS3P23396 DCTN2-213ENST00000549712 211 ntTSL 52.52□□□□□ -2.014e-13■□□□□ 8.3
RPS3P23396 DNAJA2-204ENST00000617000 1885 ntTSL 210.25□□□□□ -0.774e-12■□□□□ 8.3
RPS3P23396 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.13□□□□□ -0.154e-13■□□□□ 8.3
RPS3P23396 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC9.38□□□□□ -0.914e-13■□□□□ 8.3
RPS3P23396 SF3B1-203ENST00000414174 593 ntTSL 43.05□□□□□ -1.924e-13■□□□□ 8.3
RPS3P23396 RRBP1-207ENST00000468428 2200 ntTSL 216.37■□□□□ 0.213e-47■□□□□ 8.3
RPS3P23396 BSDC1-208ENST00000474414 978 ntTSL 520.64■□□□□ 0.894e-8■□□□□ 8.3
RPS3P23396 BSDC1-210ENST00000527163 567 ntTSL 514.01□□□□□ -0.174e-8■□□□□ 8.3
RPS3P23396 BSDC1-211ENST00000527513 576 ntTSL 514.01□□□□□ -0.174e-8■□□□□ 8.3
RPS3P23396 FAM60A-204ENST00000536836 1734 ntTSL 213.76□□□□□ -0.214e-8■□□□□ 8.3
RPS3P23396 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.74□□□□□ -0.214e-8■□□□□ 8.3
RPS3P23396 BSDC1-212ENST00000530485 482 ntTSL 512.49□□□□□ -0.414e-8■□□□□ 8.3
RPS3P23396 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC11.31□□□□□ -0.64e-8■□□□□ 8.3
RPS3P23396 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.734e-8■□□□□ 8.3
RPS3P23396 FAM60A-205ENST00000539004 459 ntTSL 52.08□□□□□ -2.084e-8■□□□□ 8.3
RPS3P23396 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.11■□□□□ 0.173e-9■□□□□ 8.3
RPS3P23396 SLC19A1-206ENST00000460174 600 ntTSL 313.59□□□□□ -0.233e-9■□□□□ 8.3
RPS3P23396 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.813e-9■□□□□ 8.3
RPS3P23396 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.853e-9■□□□□ 8.3
RPS3P23396 KANK1-209ENST00000489369 7193 ntTSL 59.09□□□□□ -0.953e-9■□□□□ 8.3
RPS3P23396 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.043e-9■□□□□ 8.3
RPS3P23396 KANK1-201ENST00000354485 6912 ntTSL 28.03□□□□□ -1.123e-9■□□□□ 8.3
RPS3P23396 APP-216ENST00000491395 619 ntTSL 27.95□□□□□ -1.142e-13■□□□□ 8.3
RPS3P23396 NCSTN-212ENST00000469159 856 ntTSL 27.25□□□□□ -1.252e-17■□□□□ 8.3
RPS3P23396 HNRNPD-206ENST00000508119 735 ntTSL 28.98□□□□□ -0.971e-9■□□□□ 8.3
RPS3P23396 GATA2-204ENST00000489987 1433 ntTSL 220.43■□□□□ 0.864e-8■□□□□ 8.3
RPS3P23396 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.68■□□□□ 0.424e-8■□□□□ 8.3
RPS3P23396 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.93□□□□□ -0.184e-8■□□□□ 8.3
RPS3P23396 CORO1C-206ENST00000546705 577 ntTSL 313.13□□□□□ -0.314e-8■□□□□ 8.3
RPS3P23396 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.334e-8■□□□□ 8.3
RPS3P23396 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.144e-8■□□□□ 8.3
RPS3P23396 CORO1C-211ENST00000549387 873 ntTSL 35.49□□□□□ -1.534e-8■□□□□ 8.3
RPS3P23396 HMGN2-205ENST00000466194 952 ntTSL 217.48■□□□□ 0.392e-6■□□□□ 8.3
RPS3P23396 HMGN2-209ENST00000493418 1496 ntTSL 26.48□□□□□ -1.372e-6■□□□□ 8.3
RPS3P23396 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.342e-16■□□□□ 8.2
RPS3P23396 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.76■■□□□ 1.874e-6■□□□□ 8.2
RPS3P23396 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.744e-6■□□□□ 8.2
RPS3P23396 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.77■■□□□ 1.564e-6■□□□□ 8.2
RPS3P23396 BBC3-205ENST00000598636 900 ntTSL 223.24■■□□□ 1.314e-6■□□□□ 8.2
RPS3P23396 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.314e-6■□□□□ 8.2
RPS3P23396 PFKFB4-205ENST00000417753 1744 ntTSL 1 (best)23.23■■□□□ 1.314e-6■□□□□ 8.2
RPS3P23396 PFKFB4-207ENST00000445633 1733 ntTSL 1 (best)23.23■■□□□ 1.314e-6■□□□□ 8.2
RPS3P23396 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.77■■□□□ 1.244e-6■□□□□ 8.2
RPS3P23396 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.17■■□□□ 1.144e-6■□□□□ 8.2
RPS3P23396 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.32■■□□□ 14e-6■□□□□ 8.2
RPS3P23396 PFKFB4-213ENST00000490115 1757 ntTSL 1 (best)18.85■□□□□ 0.614e-6■□□□□ 8.2
RPS3P23396 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)18.81■□□□□ 0.64e-6■□□□□ 8.2
RPS3P23396 GRHPR-204ENST00000480596 1893 ntTSL 218.2■□□□□ 0.54e-6■□□□□ 8.2
RPS3P23396 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-6■□□□□ 8.2
RPS3P23396 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.44■□□□□ 0.384e-6■□□□□ 8.2
RPS3P23396 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.134e-6■□□□□ 8.2
RPS3P23396 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.124e-6■□□□□ 8.2
RPS3P23396 MAN2A2-202ENST00000557865 2671 ntTSL 212.94□□□□□ -0.344e-6■□□□□ 8.2
RPS3P23396 MAN2A2-203ENST00000557990 956 ntTSL 512.83□□□□□ -0.364e-6■□□□□ 8.2
RPS3P23396 GRHPR-210ENST00000497693 4762 ntTSL 212.53□□□□□ -0.44e-6■□□□□ 8.2
RPS3P23396 MAN2A2-212ENST00000559341 623 ntTSL 212.21□□□□□ -0.454e-6■□□□□ 8.2
RPS3P23396 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)11.87□□□□□ -0.514e-6■□□□□ 8.2
RPS3P23396 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.574e-6■□□□□ 8.2
RPS3P23396 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.684e-6■□□□□ 8.2
RPS3P23396 MAN2A2-230ENST00000561448 1443 ntTSL 210.8□□□□□ -0.684e-6■□□□□ 8.2
RPS3P23396 OTUD5-207ENST00000484499 924 ntTSL 59.17□□□□□ -0.941e-14■□□□□ 8.2
RPS3P23396 MAN2A2-226ENST00000560926 569 ntTSL 49.14□□□□□ -0.954e-6■□□□□ 8.2
RPS3P23396 MAN2A2-219ENST00000560147 492 ntTSL 48.67□□□□□ -1.024e-6■□□□□ 8.2
RPS3P23396 MAN2A2-225ENST00000560880 718 ntTSL 27.59□□□□□ -1.194e-6■□□□□ 8.2
RPS3P23396 MAN2A2-208ENST00000558538 576 ntTSL 46.43□□□□□ -1.384e-6■□□□□ 8.2
RPS3P23396 UBAP2L-219ENST00000495676 867 ntTSL 35.28□□□□□ -1.564e-6■□□□□ 8.2
RPS3P23396 UBAP2L-217ENST00000489076 850 ntTSL 25.06□□□□□ -1.64e-6■□□□□ 8.2
RPS3P23396 PRPSAP1-205ENST00000442767 908 ntTSL 522.42■■□□□ 1.182e-6■□□□□ 8.2
RPS3P23396 PRPSAP1-202ENST00000423915 549 ntTSL 415.94■□□□□ 0.142e-6■□□□□ 8.2
RPS3P23396 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.262e-6■□□□□ 8.2
RPS3P23396 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC10.32□□□□□ -0.762e-6■□□□□ 8.2
RPS3P23396 PRPSAP1-203ENST00000435555 916 ntTSL 510.14□□□□□ -0.792e-6■□□□□ 8.2
RPS3P23396 GLMP-208ENST00000481050 684 ntTSL 317.51■□□□□ 0.396e-9■□□□□ 8.2
RPS3P23396 GLMP-203ENST00000461597 658 ntTSL 315.3■□□□□ 0.046e-9■□□□□ 8.2
RPS3P23396 GLMP-209ENST00000482579 572 ntTSL 311.41□□□□□ -0.586e-9■□□□□ 8.2
RPS3P23396 TMED2-202ENST00000438031 603 ntTSL 425.01■■□□□ 1.593e-12■□□□□ 8.2
RPS3P23396 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.263e-12■□□□□ 8.2
RPS3P23396 TNRC18-206ENST00000434361 577 ntTSL 315.73■□□□□ 0.113e-12■□□□□ 8.2
RPS3P23396 ERGIC3-213ENST00000475211 514 ntTSL 313.57□□□□□ -0.243e-12■□□□□ 8.2
RPS3P23396 TMED2-204ENST00000543425 1350 ntTSL 313.41□□□□□ -0.263e-12■□□□□ 8.2
RPS3P23396 TMED2-205ENST00000544188 433 ntTSL 211.46□□□□□ -0.573e-12■□□□□ 8.2
Retrieved 100 of 24,271 protein–RNA pairs in 242.2 ms