RNA–Protein interactions for RNA: ENST00000417753.5

PFKFB4-205, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 1 (best)

Gene PFKFB4, Length 1,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-205ENST00000417753 NISCHQ9Y2I1 1504 aa54.66■■■■■ 6.34
PFKFB4-205ENST00000417753 CCDC180Q9P1Z9 1646 aa47.98■■■■■ 5.27
PFKFB4-205ENST00000417753 ABCC9O60706 1549 aa45.88■■■■■ 4.93
PFKFB4-205ENST00000417753 ZCCHC6Q5VYS8 1495 aaKnown RBP45.81■■■■■ 4.92
PFKFB4-205ENST00000417753 DCAF8L2P0C7V8 631 aa45.26■■■■■ 4.84
PFKFB4-205ENST00000417753 DCAF1Q9Y4B6 1507 aa45.19■■■■■ 4.82
PFKFB4-205ENST00000417753 MYO15BQ96JP2 1530 aa44.88■■■■■ 4.77
PFKFB4-205ENST00000417753 NACADO15069 1562 aa44.79■■■■■ 4.76
PFKFB4-205ENST00000417753 RB1CC1Q8TDY2 1594 aa44.55■■■■■ 4.72
PFKFB4-205ENST00000417753 SHROOM4Q9ULL8 1493 aa44.14■■■■■ 4.66
PFKFB4-205ENST00000417753 SCRIBQ14160 1630 aa44.02■■■■■ 4.64
PFKFB4-205ENST00000417753 UNC13AQ9UPW8 1703 aa43.72■■■■■ 4.59
PFKFB4-205ENST00000417753 BICRAQ9NZM4 1560 aa43.27■■■■■ 4.52
PFKFB4-205ENST00000417753 PABPN1Q86U42 306 aaKnown RBP eCLIP43.12■■■■■ 4.49
PFKFB4-205ENST00000417753 CECR2Q9BXF3 1484 aa42.54■■■■■ 4.4
PFKFB4-205ENST00000417753 BAZ1AQ9NRL2 1556 aaPredicted RBP42.24■■■■■ 4.35
PFKFB4-205ENST00000417753 MROH2BQ7Z745 1585 aa42.22■■■■■ 4.35
PFKFB4-205ENST00000417753 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
PFKFB4-205ENST00000417753 RSF1Q96T23 1441 aaPredicted RBP42.16■■■■■ 4.34
PFKFB4-205ENST00000417753 SUPT5HO00267 1087 aaKnown RBP42.12■■■■■ 4.33
PFKFB4-205ENST00000417753 EIF4G1Q04637 1599 aaKnown RBP41.99■■■■■ 4.31
PFKFB4-205ENST00000417753 WIZO95785 1651 aa41.86■■■■■ 4.29
PFKFB4-205ENST00000417753 PEG3Q9GZU2 1588 aa41.67■■■■■ 4.26
PFKFB4-205ENST00000417753 ATAD2BQ9ULI0 1458 aa41.61■■■■■ 4.25
PFKFB4-205ENST00000417753 SMARCA2P51531 1590 aa41.56■■■■■ 4.24
PFKFB4-205ENST00000417753 CC2D2AQ9P2K1 1620 aa41.53■■■■■ 4.24
PFKFB4-205ENST00000417753 TOP2AP11388 1531 aaKnown RBP41.39■■■■■ 4.22
PFKFB4-205ENST00000417753 NCAPD3P42695 1498 aa41.34■■■■■ 4.21
PFKFB4-205ENST00000417753 BAZ1BQ9UIG0 1483 aaKnown RBP41.32■■■■■ 4.21
PFKFB4-205ENST00000417753 HMGXB3Q12766 1538 aa41.25■■■■■ 4.19
PFKFB4-205ENST00000417753 DNAJC5BQ9UF47 199 aa41.02■■■■■ 4.16
PFKFB4-205ENST00000417753 CCDC88BA6NC98 1476 aa40.94■■■■■ 4.14
PFKFB4-205ENST00000417753 CFTRP13569 1480 aa40.26■■■■■ 4.04
PFKFB4-205ENST00000417753 CADPSQ9ULU8 1353 aa40.22■■■■■ 4.03
PFKFB4-205ENST00000417753 NESP48681 1621 aa40.11■■■■■ 4.01
PFKFB4-205ENST00000417753 PRDM2Q13029 1718 aa40.07■■■■■ 4.01
PFKFB4-205ENST00000417753 LAMC3Q9Y6N6 1575 aa40.05■■■■■ 4
PFKFB4-205ENST00000417753 CHIC1Q5VXU3 224 aa40.03■■■■■ 4
PFKFB4-205ENST00000417753 ABCC8Q09428 1581 aa39.92■■■■□ 3.98
PFKFB4-205ENST00000417753 FANCD2Q9BXW9 1451 aa39.79■■■■□ 3.96
PFKFB4-205ENST00000417753 PDS5BQ9NTI5 1447 aa39.71■■■■□ 3.95
PFKFB4-205ENST00000417753 WRNQ14191 1432 aaPredicted RBP eCLIP39.69■■■■□ 3.94
PFKFB4-205ENST00000417753 KIF21AQ7Z4S6 1674 aa39.65■■■■□ 3.94
PFKFB4-205ENST00000417753 TRIM41Q8WV44 630 aa39.64■■■■□ 3.94
PFKFB4-205ENST00000417753 CEP164Q9UPV0 1460 aa39.6■■■■□ 3.93
PFKFB4-205ENST00000417753 SYNJ1O43426 1573 aa39.6■■■■□ 3.93
PFKFB4-205ENST00000417753 CUX1P39880 1505 aa39.52■■■■□ 3.92
PFKFB4-205ENST00000417753 TOP2BQ02880 1626 aa39.47■■■■□ 3.91
PFKFB4-205ENST00000417753 BIVM-ERCC5R4GMW8 1640 aa39.45■■■■□ 3.91
PFKFB4-205ENST00000417753 ERCC6Q03468 1493 aa39.37■■■■□ 3.89
PFKFB4-205ENST00000417753 URB2Q14146 1524 aaKnown RBP39.36■■■■□ 3.89
PFKFB4-205ENST00000417753 DNMBPQ6XZF7 1577 aa39.34■■■■□ 3.89
PFKFB4-205ENST00000417753 TOPBP1Q92547 1522 aa39.31■■■■□ 3.88
PFKFB4-205ENST00000417753 MRC2Q9UBG0 1479 aa39.27■■■■□ 3.88
PFKFB4-205ENST00000417753 FGD5Q6ZNL6 1462 aa39.17■■■■□ 3.86
PFKFB4-205ENST00000417753 THOC2Q8NI27 1593 aaKnown RBP39.16■■■■□ 3.86
PFKFB4-205ENST00000417753 WDR62O43379 1518 aa39.12■■■■□ 3.85
PFKFB4-205ENST00000417753 POLA1P09884 1462 aaPredicted RBP39.08■■■■□ 3.85
PFKFB4-205ENST00000417753 SOGA1O94964 1423 aa39.02■■■■□ 3.84
PFKFB4-205ENST00000417753 RAD54L2Q9Y4B4 1467 aa38.94■■■■□ 3.82
PFKFB4-205ENST00000417753 RUSC2Q8N2Y8 1516 aa38.93■■■■□ 3.82
PFKFB4-205ENST00000417753 FAM9AQ8IZU1 332 aaPredicted RBP38.92■■■■□ 3.82
PFKFB4-205ENST00000417753 CUX2O14529 1486 aa38.85■■■■□ 3.81
PFKFB4-205ENST00000417753 ABCA10Q8WWZ4 1543 aa38.8■■■■□ 3.8
PFKFB4-205ENST00000417753 TARBP1Q13395 1621 aaKnown RBP38.8■■■■□ 3.8
PFKFB4-205ENST00000417753 WDR97A6NE52 1622 aa38.79■■■■□ 3.8
PFKFB4-205ENST00000417753 EEA1Q15075 1411 aa38.77■■■■□ 3.8
PFKFB4-205ENST00000417753 KIF27Q86VH2 1401 aa38.72■■■■□ 3.79
PFKFB4-205ENST00000417753 IFT140Q96RY7 1462 aa38.69■■■■□ 3.78
PFKFB4-205ENST00000417753 CSRNP3Q8WYN3 585 aa38.61■■■■□ 3.77
PFKFB4-205ENST00000417753 TDRD9Q8NDG6 1382 aaKnown RBP38.59■■■■□ 3.77
PFKFB4-205ENST00000417753 ABCA5Q8WWZ7 1642 aa38.57■■■■□ 3.77
PFKFB4-205ENST00000417753 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
PFKFB4-205ENST00000417753 GAPVD1Q14C86 1478 aa38.48■■■■□ 3.75
PFKFB4-205ENST00000417753 LOC105371045A0A1W2PR82 267 aa38.47■■■■□ 3.75
PFKFB4-205ENST00000417753 AQRO60306 1485 aaKnown RBP eCLIP38.46■■■■□ 3.754e-7■■■■■ 27.5
PFKFB4-205ENST00000417753 IGF1RP08069 1367 aa38.46■■■■□ 3.75
PFKFB4-205ENST00000417753 EIF4G3O43432 1585 aaKnown RBP38.4■■■■□ 3.74
PFKFB4-205ENST00000417753 EHMT2Q96KQ7 1210 aa38.4■■■■□ 3.74
PFKFB4-205ENST00000417753 PBRM1Q86U86 1689 aa38.37■■■■□ 3.73
PFKFB4-205ENST00000417753 KIF21BO75037 1637 aa38.35■■■■□ 3.73
PFKFB4-205ENST00000417753 PRXQ9BXM0 1461 aa38.34■■■■□ 3.73
PFKFB4-205ENST00000417753 ERICH3Q5RHP9 1530 aa38.34■■■■□ 3.73
PFKFB4-205ENST00000417753 GRIN2BQ13224 1484 aa38.27■■■■□ 3.72
PFKFB4-205ENST00000417753 RAPGEF2Q9Y4G8 1499 aa38.25■■■■□ 3.71
PFKFB4-205ENST00000417753 CARMIL1Q5VZK9 1371 aa38.24■■■■□ 3.71
PFKFB4-205ENST00000417753 CUL7Q14999 1698 aa38.24■■■■□ 3.71
PFKFB4-205ENST00000417753 GOLGA3Q08378 1498 aa38.23■■■■□ 3.71
PFKFB4-205ENST00000417753 SNAPC4Q5SXM2 1469 aa38.11■■■■□ 3.69
PFKFB4-205ENST00000417753 ADAMTS12P58397 1594 aa38.11■■■■□ 3.69
PFKFB4-205ENST00000417753 UBTFP17480 764 aaKnown RBP38.05■■■■□ 3.68
PFKFB4-205ENST00000417753 FHAD1B1AJZ9 1412 aa38.05■■■■□ 3.68
PFKFB4-205ENST00000417753 MAGI1Q96QZ7 1491 aaPredicted RBP38.02■■■■□ 3.68
PFKFB4-205ENST00000417753 TNIKQ9UKE5 1360 aa37.98■■■■□ 3.67
PFKFB4-205ENST00000417753 SYNJ2O15056 1496 aa37.88■■■■□ 3.65
PFKFB4-205ENST00000417753 GRIN2AQ12879 1464 aa37.82■■■■□ 3.64
PFKFB4-205ENST00000417753 CHMP7Q8WUX9 453 aaPredicted RBP37.78■■■■□ 3.64
PFKFB4-205ENST00000417753 CTTNBP2Q8WZ74 1663 aa37.76■■■■□ 3.63
PFKFB4-205ENST00000417753 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
PFKFB4-205ENST00000417753 FBLN2P98095 1184 aa37.75■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms