RNA–Protein interactions for RNA: ENST00000543425.1

TMED2-204, Transcript of transmembrane p24 trafficking protein 2, humanhuman

TSL 3

Gene TMED2, Length 1,350 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED2-204ENST00000543425 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
TMED2-204ENST00000543425 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.1
TMED2-204ENST00000543425 ABCC9O60706 1549 aa28.09■■■□□ 2.09
TMED2-204ENST00000543425 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
TMED2-204ENST00000543425 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
TMED2-204ENST00000543425 NACADO15069 1562 aa26.72■■□□□ 1.87
TMED2-204ENST00000543425 MYO15BQ96JP2 1530 aa26.47■■□□□ 1.83
TMED2-204ENST00000543425 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
TMED2-204ENST00000543425 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
TMED2-204ENST00000543425 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
TMED2-204ENST00000543425 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
TMED2-204ENST00000543425 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
TMED2-204ENST00000543425 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
TMED2-204ENST00000543425 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
TMED2-204ENST00000543425 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
TMED2-204ENST00000543425 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
TMED2-204ENST00000543425 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
TMED2-204ENST00000543425 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
TMED2-204ENST00000543425 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
TMED2-204ENST00000543425 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
TMED2-204ENST00000543425 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
TMED2-204ENST00000543425 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
TMED2-204ENST00000543425 SMARCA2P51531 1590 aa24.58■■□□□ 1.52
TMED2-204ENST00000543425 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
TMED2-204ENST00000543425 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
TMED2-204ENST00000543425 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
TMED2-204ENST00000543425 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
TMED2-204ENST00000543425 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
TMED2-204ENST00000543425 NESP48681 1621 aa24.16■■□□□ 1.46
TMED2-204ENST00000543425 CUX2O14529 1486 aa24.12■■□□□ 1.45
TMED2-204ENST00000543425 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
TMED2-204ENST00000543425 WIZO95785 1651 aa24.05■■□□□ 1.44
TMED2-204ENST00000543425 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
TMED2-204ENST00000543425 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
TMED2-204ENST00000543425 PDS5BQ9NTI5 1447 aa24.02■■□□□ 1.44
TMED2-204ENST00000543425 DNAJC5Q9H3Z4 198 aa23.9■■□□□ 1.42
TMED2-204ENST00000543425 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
TMED2-204ENST00000543425 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
TMED2-204ENST00000543425 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
TMED2-204ENST00000543425 CFTRP13569 1480 aa23.75■■□□□ 1.39
TMED2-204ENST00000543425 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
TMED2-204ENST00000543425 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
TMED2-204ENST00000543425 FANCD2Q9BXW9 1451 aa23.69■■□□□ 1.38
TMED2-204ENST00000543425 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
TMED2-204ENST00000543425 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
TMED2-204ENST00000543425 WDR62O43379 1518 aa23.59■■□□□ 1.37
TMED2-204ENST00000543425 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
TMED2-204ENST00000543425 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
TMED2-204ENST00000543425 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
TMED2-204ENST00000543425 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
TMED2-204ENST00000543425 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
TMED2-204ENST00000543425 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
TMED2-204ENST00000543425 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
TMED2-204ENST00000543425 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
TMED2-204ENST00000543425 POLA1P09884 1462 aaPredicted RBP23.02■■□□□ 1.28
TMED2-204ENST00000543425 SOGA1O94964 1423 aa23.01■■□□□ 1.27
TMED2-204ENST00000543425 AQRO60306 1485 aaKnown RBP eCLIP22.99■■□□□ 1.271e-6■■□□□ 11.4
TMED2-204ENST00000543425 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
TMED2-204ENST00000543425 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
TMED2-204ENST00000543425 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
TMED2-204ENST00000543425 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
TMED2-204ENST00000543425 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
TMED2-204ENST00000543425 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
TMED2-204ENST00000543425 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
TMED2-204ENST00000543425 CUX1P39880 1505 aa22.9■■□□□ 1.26
TMED2-204ENST00000543425 FBLN2P98095 1184 aa22.89■■□□□ 1.25
TMED2-204ENST00000543425 CHMP7Q8WUX9 453 aaPredicted RBP22.77■■□□□ 1.24
TMED2-204ENST00000543425 WDR97A6NE52 1622 aa22.77■■□□□ 1.23
TMED2-204ENST00000543425 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
TMED2-204ENST00000543425 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
TMED2-204ENST00000543425 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
TMED2-204ENST00000543425 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
TMED2-204ENST00000543425 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
TMED2-204ENST00000543425 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
TMED2-204ENST00000543425 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
TMED2-204ENST00000543425 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
TMED2-204ENST00000543425 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
TMED2-204ENST00000543425 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
TMED2-204ENST00000543425 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
TMED2-204ENST00000543425 CYB5RLQ6IPT4 315 aa22.62■■□□□ 1.21
TMED2-204ENST00000543425 CHD1O14646 1710 aa22.61■■□□□ 1.21
TMED2-204ENST00000543425 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
TMED2-204ENST00000543425 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
TMED2-204ENST00000543425 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
TMED2-204ENST00000543425 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
TMED2-204ENST00000543425 CLASP1Q7Z460 1538 aa22.47■■□□□ 1.19
TMED2-204ENST00000543425 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
TMED2-204ENST00000543425 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
TMED2-204ENST00000543425 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
TMED2-204ENST00000543425 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
TMED2-204ENST00000543425 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
TMED2-204ENST00000543425 ADAMTS12P58397 1594 aa22.35■■□□□ 1.17
TMED2-204ENST00000543425 NUP160Q12769 1436 aa22.33■■□□□ 1.17
TMED2-204ENST00000543425 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
TMED2-204ENST00000543425 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
TMED2-204ENST00000543425 IGF1RP08069 1367 aa22.27■■□□□ 1.16
TMED2-204ENST00000543425 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
TMED2-204ENST00000543425 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
TMED2-204ENST00000543425 EEA1Q15075 1411 aa22.21■■□□□ 1.15
TMED2-204ENST00000543425 PRG4Q92954 1404 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms