Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
FNDC3AQ9Y2H6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
FNDC3AQ9Y2H6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
FNDC3AQ9Y2H6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.39■■□□□ 1.33
FNDC3AQ9Y2H6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
FNDC3AQ9Y2H6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.38■■□□□ 1.33
FNDC3AQ9Y2H6 AC135731.1-201ENST00000569415 2548 ntBASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 MIR3621-201ENST00000580529 85 ntBASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 MTDHP2-201ENST00000601468 714 ntBASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FNDC3AQ9Y2H6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3AQ9Y2H6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 MIR6724-1-201ENST00000616420 92 ntBASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 MIR6724-2-201ENST00000616483 92 ntBASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 MIR6724-4-201ENST00000617390 92 ntBASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 AC110285.6-201ENST00000617652 491 ntBASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 MIR6724-3-201ENST00000622482 92 ntBASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.35■■□□□ 1.33
FNDC3AQ9Y2H6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 AC090877.2-201ENST00000558441 1738 ntBASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3AQ9Y2H6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FNDC3AQ9Y2H6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.33■■□□□ 1.33
FNDC3AQ9Y2H6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.33■■□□□ 1.33
FNDC3AQ9Y2H6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FNDC3AQ9Y2H6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.33■■□□□ 1.33
FNDC3AQ9Y2H6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FNDC3AQ9Y2H6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 MIR6089-201ENST00000616698 64 ntBASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 AP003733.4-201ENST00000623785 1697 ntBASIC23.32■■□□□ 1.32
FNDC3AQ9Y2H6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 AC011551.1-201ENST00000614101 683 ntBASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
FNDC3AQ9Y2H6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3AQ9Y2H6 AL356740.2-201ENST00000601559 647 ntBASIC23.3■■□□□ 1.32
FNDC3AQ9Y2H6 MIR4466-201ENST00000606121 54 ntBASIC23.3■■□□□ 1.32
FNDC3AQ9Y2H6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3AQ9Y2H6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FNDC3AQ9Y2H6 AC096631.2-201ENST00000436136 790 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms