Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC35.51■■■■□ 3.28
COL17A1Q9UMD9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
COL17A1Q9UMD9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC35.51■■■■□ 3.28
COL17A1Q9UMD9 CCDC92B-201ENST00000575506 885 ntBASIC35.51■■■■□ 3.28
COL17A1Q9UMD9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC35.51■■■■□ 3.28
COL17A1Q9UMD9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC35.51■■■■□ 3.27
COL17A1Q9UMD9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
COL17A1Q9UMD9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL17A1Q9UMD9 AC139426.1-201ENST00000568218 2529 ntBASIC35.49■■■■□ 3.27
COL17A1Q9UMD9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
COL17A1Q9UMD9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
COL17A1Q9UMD9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
COL17A1Q9UMD9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC35.49■■■■□ 3.27
COL17A1Q9UMD9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 AC006455.2-201ENST00000429931 906 ntBASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC35.48■■■■□ 3.27
COL17A1Q9UMD9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
COL17A1Q9UMD9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
COL17A1Q9UMD9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.47■■■■□ 3.27
COL17A1Q9UMD9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC35.47■■■■□ 3.27
COL17A1Q9UMD9 GXYLT1P5-201ENST00000614548 1189 ntBASIC35.47■■■■□ 3.27
COL17A1Q9UMD9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC35.46■■■■□ 3.27
COL17A1Q9UMD9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
COL17A1Q9UMD9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
COL17A1Q9UMD9 GXYLT1P2-201ENST00000433312 1230 ntBASIC35.46■■■■□ 3.27
COL17A1Q9UMD9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 NTF6G-201ENST00000591094 616 ntBASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 TMEM191A-211ENST00000637163 1067 ntBASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 DRD5P2-201ENST00000421395 2012 ntBASIC35.45■■■■□ 3.27
COL17A1Q9UMD9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC35.45■■■■□ 3.26
COL17A1Q9UMD9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
COL17A1Q9UMD9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
COL17A1Q9UMD9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC35.44■■■■□ 3.26
COL17A1Q9UMD9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 NME4-202ENST00000382940 766 ntTSL 3 BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 AC104771.1-201ENST00000603335 964 ntBASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
COL17A1Q9UMD9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
COL17A1Q9UMD9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC35.42■■■■□ 3.26
COL17A1Q9UMD9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC35.42■■■■□ 3.26
COL17A1Q9UMD9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
COL17A1Q9UMD9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 MIR6084-201ENST00000622012 110 ntBASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
COL17A1Q9UMD9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
COL17A1Q9UMD9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC35.4■■■■□ 3.26
COL17A1Q9UMD9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
COL17A1Q9UMD9 AC009102.2-201ENST00000606772 1639 ntBASIC35.4■■■■□ 3.26
COL17A1Q9UMD9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.39■■■■□ 3.26
COL17A1Q9UMD9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
COL17A1Q9UMD9 AC245100.8-202ENST00000629247 1058 ntBASIC35.39■■■■□ 3.26
COL17A1Q9UMD9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
COL17A1Q9UMD9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
COL17A1Q9UMD9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
COL17A1Q9UMD9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 TSPY26P-201ENST00000476365 1326 ntBASIC35.38■■■■□ 3.25
COL17A1Q9UMD9 CDCA4P2-201ENST00000441182 718 ntBASIC35.36■■■■□ 3.25
COL17A1Q9UMD9 TERF1P2-201ENST00000583350 1212 ntBASIC35.36■■■■□ 3.25
COL17A1Q9UMD9 AC080038.1-201ENST00000611274 1154 ntBASIC35.36■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms