Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIMC1Q8NDZ2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 AF131216.4-201ENST00000638924 1588 ntBASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIMC1Q8NDZ2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 AL031848.2-201ENST00000607670 837 ntBASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIMC1Q8NDZ2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIMC1Q8NDZ2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SIMC1Q8NDZ2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.58■■□□□ 1.04
SIMC1Q8NDZ2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SIMC1Q8NDZ2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIMC1Q8NDZ2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SIMC1Q8NDZ2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 CLDN5-201ENST00000403084 2357 ntBASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 ABCB10P4-201ENST00000566803 2184 ntBASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIMC1Q8NDZ2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIMC1Q8NDZ2 AC079834.2-201ENST00000609776 1949 ntBASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIMC1Q8NDZ2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 AL451085.2-201ENST00000605085 799 ntBASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 AC131274.2-201ENST00000580697 1507 ntBASIC21.54■■□□□ 1.04
SIMC1Q8NDZ2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.53■■□□□ 1.04
SIMC1Q8NDZ2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 AC141586.4-201ENST00000624558 1573 ntBASIC21.52■■□□□ 1.04
SIMC1Q8NDZ2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SIMC1Q8NDZ2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SIMC1Q8NDZ2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.52■■□□□ 1.03
SIMC1Q8NDZ2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms