Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
TTC9CQ8N5M4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 AL022069.1-201ENST00000568025 1636 ntBASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 MIR4281-201ENST00000580852 62 ntBASIC18.13■□□□□ 0.49
TTC9CQ8N5M4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC9CQ8N5M4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 KRT8P33-201ENST00000508125 1423 ntBASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC9CQ8N5M4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TTC9CQ8N5M4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 AC103724.3-201ENST00000564481 992 ntBASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC9CQ8N5M4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC9CQ8N5M4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC9CQ8N5M4 AF131216.4-201ENST00000638924 1588 ntBASIC18.08■□□□□ 0.49
TTC9CQ8N5M4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC9CQ8N5M4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.08■□□□□ 0.49
TTC9CQ8N5M4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 AC131274.2-201ENST00000580697 1507 ntBASIC18.08■□□□□ 0.48
TTC9CQ8N5M4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 ABCB10P4-201ENST00000566803 2184 ntBASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC9CQ8N5M4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.06■□□□□ 0.48
TTC9CQ8N5M4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 AL031848.2-201ENST00000607670 837 ntBASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC9CQ8N5M4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC9CQ8N5M4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms