Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC34.71■■■■□ 3.15
ABCA6Q8N139 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
ABCA6Q8N139 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
ABCA6Q8N139 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
ABCA6Q8N139 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC34.71■■■■□ 3.15
ABCA6Q8N139 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
ABCA6Q8N139 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC34.7■■■■□ 3.15
ABCA6Q8N139 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.7■■■■□ 3.15
ABCA6Q8N139 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L2-201ENST00000561772 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L6-201ENST00000626483 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L1-201ENST00000627662 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L8-201ENST00000629013 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L3-201ENST00000630187 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L7-201ENST00000630678 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 DUX4L5-201ENST00000630834 1275 ntBASIC34.7■■■■□ 3.15
ABCA6Q8N139 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
ABCA6Q8N139 AC009102.2-201ENST00000606772 1639 ntBASIC34.7■■■■□ 3.14
ABCA6Q8N139 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC34.7■■■■□ 3.14
ABCA6Q8N139 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
ABCA6Q8N139 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC34.69■■■■□ 3.14
ABCA6Q8N139 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
ABCA6Q8N139 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC34.69■■■■□ 3.14
ABCA6Q8N139 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC34.69■■■■□ 3.14
ABCA6Q8N139 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
ABCA6Q8N139 AK1-201ENST00000223836 736 ntTSL 3 BASIC34.68■■■■□ 3.14
ABCA6Q8N139 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
ABCA6Q8N139 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC34.68■■■■□ 3.14
ABCA6Q8N139 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC34.68■■■■□ 3.14
ABCA6Q8N139 AC022517.1-201ENST00000592429 346 ntBASIC34.68■■■■□ 3.14
ABCA6Q8N139 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
ABCA6Q8N139 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
ABCA6Q8N139 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
ABCA6Q8N139 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC34.67■■■■□ 3.14
ABCA6Q8N139 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC34.67■■■■□ 3.14
ABCA6Q8N139 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
ABCA6Q8N139 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
ABCA6Q8N139 AL137784.2-201ENST00000607332 1000 ntBASIC34.66■■■■□ 3.14
ABCA6Q8N139 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC34.66■■■■□ 3.14
ABCA6Q8N139 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
ABCA6Q8N139 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
ABCA6Q8N139 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC34.66■■■■□ 3.14
ABCA6Q8N139 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
ABCA6Q8N139 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
ABCA6Q8N139 DENND3-207ENST00000518347 850 ntTSL 2 BASIC34.66■■■■□ 3.14
ABCA6Q8N139 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
ABCA6Q8N139 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 ERN1-208ENST00000606895 2068 ntBASIC34.65■■■■□ 3.14
ABCA6Q8N139 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
ABCA6Q8N139 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
ABCA6Q8N139 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
ABCA6Q8N139 REST-206ENST00000612429 1376 ntTSL 5 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 REST-207ENST00000616975 1370 ntTSL 5 BASIC34.65■■■■□ 3.14
ABCA6Q8N139 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
ABCA6Q8N139 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC34.64■■■■□ 3.14
ABCA6Q8N139 HES6-206ENST00000409574 738 ntTSL 2 BASIC34.64■■■■□ 3.14
ABCA6Q8N139 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
ABCA6Q8N139 YBX1P1-201ENST00000445822 960 ntBASIC34.64■■■■□ 3.14
ABCA6Q8N139 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
ABCA6Q8N139 MPST-208ENST00000628507 698 ntTSL 5 BASIC34.64■■■■□ 3.14
ABCA6Q8N139 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
ABCA6Q8N139 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ABCA6Q8N139 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ABCA6Q8N139 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC34.63■■■■□ 3.13
ABCA6Q8N139 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC34.63■■■■□ 3.13
ABCA6Q8N139 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA6Q8N139 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA6Q8N139 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC34.62■■■■□ 3.13
ABCA6Q8N139 AC027612.3-201ENST00000413684 1047 ntBASIC34.62■■■■□ 3.13
ABCA6Q8N139 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
ABCA6Q8N139 BX842568.3-201ENST00000418104 571 ntBASIC34.62■■■■□ 3.13
ABCA6Q8N139 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC34.62■■■■□ 3.13
ABCA6Q8N139 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC34.62■■■■□ 3.13
ABCA6Q8N139 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA6Q8N139 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC34.61■■■■□ 3.13
ABCA6Q8N139 AC233992.3-201ENST00000607491 485 ntBASIC34.61■■■■□ 3.13
ABCA6Q8N139 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.61■■■■□ 3.13
ABCA6Q8N139 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
ABCA6Q8N139 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC34.6■■■■□ 3.13
ABCA6Q8N139 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC34.6■■■■□ 3.13
ABCA6Q8N139 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
ABCA6Q8N139 SLC47A1P1-202ENST00000449666 945 ntBASIC34.59■■■■□ 3.13
ABCA6Q8N139 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC34.59■■■■□ 3.13
ABCA6Q8N139 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA6Q8N139 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC34.59■■■■□ 3.13
ABCA6Q8N139 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA6Q8N139 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA6Q8N139 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC34.58■■■■□ 3.13
ABCA6Q8N139 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC34.58■■■■□ 3.13
ABCA6Q8N139 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.58■■■■□ 3.13
ABCA6Q8N139 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.13
ABCA6Q8N139 AC142086.6-201ENST00000621154 1765 ntBASIC34.57■■■■□ 3.12
ABCA6Q8N139 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC34.57■■■■□ 3.12
ABCA6Q8N139 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
ABCA6Q8N139 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms