Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RBM48Q5RL73 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21■□□□□ 0.95
RBM48Q5RL73 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
RBM48Q5RL73 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBM48Q5RL73 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RBM48Q5RL73 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBM48Q5RL73 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM48Q5RL73 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM48Q5RL73 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.99■□□□□ 0.95
RBM48Q5RL73 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RBM48Q5RL73 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.99■□□□□ 0.95
RBM48Q5RL73 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM48Q5RL73 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM48Q5RL73 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.98■□□□□ 0.95
RBM48Q5RL73 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RBM48Q5RL73 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM48Q5RL73 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM48Q5RL73 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RBM48Q5RL73 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.98■□□□□ 0.95
RBM48Q5RL73 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM48Q5RL73 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RBM48Q5RL73 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM48Q5RL73 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RBM48Q5RL73 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RBM48Q5RL73 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.97■□□□□ 0.95
RBM48Q5RL73 AC021231.2-201ENST00000594613 730 ntBASIC20.97■□□□□ 0.95
RBM48Q5RL73 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM48Q5RL73 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RBM48Q5RL73 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RBM48Q5RL73 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.96■□□□□ 0.95
RBM48Q5RL73 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.96■□□□□ 0.95
RBM48Q5RL73 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM48Q5RL73 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.95■□□□□ 0.95
RBM48Q5RL73 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBM48Q5RL73 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RBM48Q5RL73 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RBM48Q5RL73 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM48Q5RL73 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBM48Q5RL73 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM48Q5RL73 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.95■□□□□ 0.94
RBM48Q5RL73 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM48Q5RL73 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM48Q5RL73 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RBM48Q5RL73 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RBM48Q5RL73 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM48Q5RL73 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RBM48Q5RL73 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM48Q5RL73 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.94■□□□□ 0.94
RBM48Q5RL73 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBM48Q5RL73 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
RBM48Q5RL73 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.94■□□□□ 0.94
RBM48Q5RL73 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RBM48Q5RL73 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM48Q5RL73 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM48Q5RL73 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM48Q5RL73 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.93■□□□□ 0.94
RBM48Q5RL73 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM48Q5RL73 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBM48Q5RL73 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RBM48Q5RL73 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBM48Q5RL73 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
RBM48Q5RL73 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.92■□□□□ 0.94
RBM48Q5RL73 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RBM48Q5RL73 DUX4L29-201ENST00000425409 679 ntBASIC20.92■□□□□ 0.94
RBM48Q5RL73 AL162393.1-201ENST00000437852 946 ntBASIC20.92■□□□□ 0.94
RBM48Q5RL73 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.92■□□□□ 0.94
RBM48Q5RL73 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBM48Q5RL73 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RBM48Q5RL73 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RBM48Q5RL73 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBM48Q5RL73 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.91■□□□□ 0.94
RBM48Q5RL73 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.91■□□□□ 0.94
RBM48Q5RL73 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBM48Q5RL73 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RBM48Q5RL73 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBM48Q5RL73 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RBM48Q5RL73 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.9■□□□□ 0.94
RBM48Q5RL73 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.9■□□□□ 0.94
RBM48Q5RL73 AC242852.2-201ENST00000615738 1807 ntBASIC20.9■□□□□ 0.94
RBM48Q5RL73 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBM48Q5RL73 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms