Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RXRBP28702 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RXRBP28702 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC30.95■■■□□ 2.55
RXRBP28702 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RXRBP28702 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC30.95■■■□□ 2.54
RXRBP28702 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
RXRBP28702 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.94■■■□□ 2.54
RXRBP28702 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RXRBP28702 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RXRBP28702 FOXO3B-201ENST00000395675 1928 ntBASIC30.94■■■□□ 2.54
RXRBP28702 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RXRBP28702 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RXRBP28702 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RXRBP28702 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.93■■■□□ 2.54
RXRBP28702 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.93■■■□□ 2.54
RXRBP28702 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.93■■■□□ 2.54
RXRBP28702 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.93■■■□□ 2.54
RXRBP28702 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RXRBP28702 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RXRBP28702 AC006015.1-201ENST00000429970 570 ntBASIC30.92■■■□□ 2.54
RXRBP28702 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
RXRBP28702 AC026185.1-201ENST00000445748 174 ntBASIC30.91■■■□□ 2.54
RXRBP28702 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC30.91■■■□□ 2.54
RXRBP28702 TERF1P2-201ENST00000583350 1212 ntBASIC30.91■■■□□ 2.54
RXRBP28702 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.9■■■□□ 2.54
RXRBP28702 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.9■■■□□ 2.54
RXRBP28702 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RXRBP28702 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.54
RXRBP28702 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RXRBP28702 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
RXRBP28702 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.89■■■□□ 2.54
RXRBP28702 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC30.89■■■□□ 2.54
RXRBP28702 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RXRBP28702 AC241377.3-202ENST00000626088 1088 ntBASIC30.89■■■□□ 2.54
RXRBP28702 AC241585.3-202ENST00000628937 1088 ntBASIC30.89■■■□□ 2.54
RXRBP28702 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
RXRBP28702 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
RXRBP28702 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RXRBP28702 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.88■■■□□ 2.53
RXRBP28702 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RXRBP28702 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RXRBP28702 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RXRBP28702 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.88■■■□□ 2.53
RXRBP28702 AC012414.1-201ENST00000556676 535 ntBASIC30.88■■■□□ 2.53
RXRBP28702 AL499627.2-201ENST00000606283 725 ntBASIC30.88■■■□□ 2.53
RXRBP28702 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.88■■■□□ 2.53
RXRBP28702 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
RXRBP28702 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RXRBP28702 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.88■■■□□ 2.53
RXRBP28702 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.87■■■□□ 2.53
RXRBP28702 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC30.87■■■□□ 2.53
RXRBP28702 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
RXRBP28702 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC30.87■■■□□ 2.53
RXRBP28702 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.87■■■□□ 2.53
RXRBP28702 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RXRBP28702 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RXRBP28702 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.86■■■□□ 2.53
RXRBP28702 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.86■■■□□ 2.53
RXRBP28702 AC093827.2-201ENST00000512654 315 ntBASIC30.86■■■□□ 2.53
RXRBP28702 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.86■■■□□ 2.53
RXRBP28702 AL354811.1-201ENST00000610286 706 ntBASIC30.86■■■□□ 2.53
RXRBP28702 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.86■■■□□ 2.53
RXRBP28702 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC30.86■■■□□ 2.53
RXRBP28702 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
RXRBP28702 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RXRBP28702 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.85■■■□□ 2.53
RXRBP28702 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.85■■■□□ 2.53
RXRBP28702 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.85■■■□□ 2.53
RXRBP28702 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RXRBP28702 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.85■■■□□ 2.53
RXRBP28702 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC30.85■■■□□ 2.53
RXRBP28702 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.85■■■□□ 2.53
RXRBP28702 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.85■■■□□ 2.53
RXRBP28702 MIR3181-201ENST00000578512 73 ntBASIC30.85■■■□□ 2.53
RXRBP28702 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RXRBP28702 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RXRBP28702 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
RXRBP28702 AC006455.2-201ENST00000429931 906 ntBASIC30.84■■■□□ 2.53
RXRBP28702 AC006970.2-201ENST00000450065 779 ntBASIC30.84■■■□□ 2.53
RXRBP28702 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RXRBP28702 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
RXRBP28702 LINC02228-203ENST00000641970 1355 ntBASIC30.83■■■□□ 2.53
RXRBP28702 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RXRBP28702 MIR572-201ENST00000384983 95 ntBASIC30.83■■■□□ 2.53
RXRBP28702 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
RXRBP28702 AC009102.2-201ENST00000606772 1639 ntBASIC30.83■■■□□ 2.53
RXRBP28702 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
RXRBP28702 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.82■■■□□ 2.53
RXRBP28702 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
RXRBP28702 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC30.82■■■□□ 2.52
RXRBP28702 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RXRBP28702 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RXRBP28702 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.82■■■□□ 2.52
RXRBP28702 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.81■■■□□ 2.52
RXRBP28702 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RXRBP28702 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RXRBP28702 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.81■■■□□ 2.52
RXRBP28702 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RXRBP28702 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
RXRBP28702 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms