Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCNYL3P0C7X3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNYL3P0C7X3 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.08■■□□□ 1.13
CCNYL3P0C7X3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.08■■□□□ 1.13
CCNYL3P0C7X3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNYL3P0C7X3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCNYL3P0C7X3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 AC022211.4-201ENST00000625094 2161 ntBASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNYL3P0C7X3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNYL3P0C7X3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 MIR638-201ENST00000385237 100 ntBASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNYL3P0C7X3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL3P0C7X3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 MIR6722-201ENST00000617286 78 ntBASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.03■■□□□ 1.12
CCNYL3P0C7X3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 SNX5-217ENST00000606557 1087 ntBASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 AC093323.1-202ENST00000635031 2045 ntBASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL3P0C7X3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CCNYL3P0C7X3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.11
CCNYL3P0C7X3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CCNYL3P0C7X3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL3P0C7X3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22■■□□□ 1.11
CCNYL3P0C7X3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNYL3P0C7X3 AC138932.3-201ENST00000567634 1902 ntBASIC22■■□□□ 1.11
CCNYL3P0C7X3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
CCNYL3P0C7X3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNYL3P0C7X3 MIR935-201ENST00000401179 91 ntBASIC22■■□□□ 1.11
CCNYL3P0C7X3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22■■□□□ 1.11
CCNYL3P0C7X3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22■■□□□ 1.11
CCNYL3P0C7X3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNYL3P0C7X3 MIR4466-201ENST00000606121 54 ntBASIC22■■□□□ 1.11
CCNYL3P0C7X3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22■■□□□ 1.11
CCNYL3P0C7X3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNYL3P0C7X3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNYL3P0C7X3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNYL3P0C7X3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNYL3P0C7X3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CCNYL3P0C7X3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNYL3P0C7X3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNYL3P0C7X3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNYL3P0C7X3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL3P0C7X3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL3P0C7X3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNYL3P0C7X3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL3P0C7X3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms