Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC092068.2-201ENST00000590491 1708 ntBASIC19.07■□□□□ 0.64
CTSDP07339 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSDP07339 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSDP07339 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSDP07339 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSDP07339 EP400NL-214ENST00000641289 2402 ntBASIC19.06■□□□□ 0.64
CTSDP07339 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.06■□□□□ 0.64
CTSDP07339 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.06■□□□□ 0.64
CTSDP07339 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CTSDP07339 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTSDP07339 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.06■□□□□ 0.64
CTSDP07339 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.06■□□□□ 0.64
CTSDP07339 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTSDP07339 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTSDP07339 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSDP07339 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.06■□□□□ 0.64
CTSDP07339 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTSDP07339 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSDP07339 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSDP07339 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTSDP07339 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSDP07339 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CTSDP07339 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTSDP07339 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.05■□□□□ 0.64
CTSDP07339 RP9P-202ENST00000450133 1212 ntBASIC19.05■□□□□ 0.64
CTSDP07339 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.05■□□□□ 0.64
CTSDP07339 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTSDP07339 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.05■□□□□ 0.64
CTSDP07339 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTSDP07339 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.05■□□□□ 0.64
CTSDP07339 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CTSDP07339 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CTSDP07339 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSDP07339 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
CTSDP07339 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 AC016575.1-201ENST00000607026 382 ntBASIC19.04■□□□□ 0.64
CTSDP07339 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSDP07339 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSDP07339 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSDP07339 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.03■□□□□ 0.64
CTSDP07339 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSDP07339 LINC00565-201ENST00000562710 2331 ntBASIC19.03■□□□□ 0.64
CTSDP07339 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSDP07339 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSDP07339 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSDP07339 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CTSDP07339 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTSDP07339 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTSDP07339 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTSDP07339 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSDP07339 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CTSDP07339 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
CTSDP07339 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSDP07339 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTSDP07339 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTSDP07339 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CTSDP07339 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTSDP07339 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.02■□□□□ 0.63
CTSDP07339 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSDP07339 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTSDP07339 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSDP07339 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.01■□□□□ 0.63
CTSDP07339 AC092296.2-201ENST00000589470 999 ntBASIC19.01■□□□□ 0.63
CTSDP07339 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSDP07339 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSDP07339 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTSDP07339 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSDP07339 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTSDP07339 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSDP07339 C1orf229-201ENST00000623686 2258 ntBASIC19■□□□□ 0.63
CTSDP07339 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSDP07339 AC093536.1-201ENST00000569153 554 ntBASIC19■□□□□ 0.63
CTSDP07339 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSDP07339 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CTSDP07339 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSDP07339 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSDP07339 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSDP07339 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTSDP07339 LINC00526-201ENST00000581067 1875 ntBASIC18.99■□□□□ 0.63
CTSDP07339 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSDP07339 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.99■□□□□ 0.63
CTSDP07339 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSDP07339 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.99■□□□□ 0.63
CTSDP07339 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.99■□□□□ 0.63
CTSDP07339 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTSDP07339 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSDP07339 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTSDP07339 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CTSDP07339 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms