Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.48■□□□□ 0.71
CD3DP04234 LINC00526-201ENST00000581067 1875 ntBASIC19.48■□□□□ 0.71
CD3DP04234 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD3DP04234 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD3DP04234 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD3DP04234 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CD3DP04234 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CD3DP04234 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD3DP04234 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD3DP04234 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
CD3DP04234 DUSP8P3-201ENST00000399571 1760 ntBASIC19.47■□□□□ 0.71
CD3DP04234 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD3DP04234 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.46■□□□□ 0.71
CD3DP04234 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD3DP04234 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CD3DP04234 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD3DP04234 GUSBP5-202ENST00000510805 1989 ntBASIC19.46■□□□□ 0.71
CD3DP04234 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD3DP04234 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.46■□□□□ 0.71
CD3DP04234 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
CD3DP04234 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.45■□□□□ 0.7
CD3DP04234 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.45■□□□□ 0.7
CD3DP04234 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
CD3DP04234 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD3DP04234 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD3DP04234 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CD3DP04234 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD3DP04234 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.43■□□□□ 0.7
CD3DP04234 FOXO3B-201ENST00000395675 1928 ntBASIC19.43■□□□□ 0.7
CD3DP04234 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD3DP04234 AC092068.2-201ENST00000590491 1708 ntBASIC19.43■□□□□ 0.7
CD3DP04234 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD3DP04234 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD3DP04234 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD3DP04234 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.43■□□□□ 0.7
CD3DP04234 AC025884.2-201ENST00000553429 711 ntBASIC19.43■□□□□ 0.7
CD3DP04234 MIR3960-201ENST00000583311 91 ntBASIC19.43■□□□□ 0.7
CD3DP04234 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD3DP04234 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD3DP04234 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CD3DP04234 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD3DP04234 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.42■□□□□ 0.7
CD3DP04234 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.42■□□□□ 0.7
CD3DP04234 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CD3DP04234 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD3DP04234 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CD3DP04234 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD3DP04234 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD3DP04234 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD3DP04234 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CD3DP04234 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.41■□□□□ 0.7
CD3DP04234 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
CD3DP04234 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD3DP04234 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 AC127496.7-201ENST00000625110 1798 ntBASIC19.4■□□□□ 0.7
CD3DP04234 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 AL157400.5-201ENST00000507624 621 ntBASIC19.4■□□□□ 0.7
CD3DP04234 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CD3DP04234 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.4■□□□□ 0.7
CD3DP04234 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD3DP04234 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD3DP04234 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CD3DP04234 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD3DP04234 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.39■□□□□ 0.7
CD3DP04234 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD3DP04234 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD3DP04234 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD3DP04234 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD3DP04234 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD3DP04234 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms