Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.05■□□□□ 0.32
SNAI2O43623 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNAI2O43623 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.05■□□□□ 0.32
SNAI2O43623 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.05■□□□□ 0.32
SNAI2O43623 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SNAI2O43623 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAI2O43623 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.04■□□□□ 0.32
SNAI2O43623 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.04■□□□□ 0.32
SNAI2O43623 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.04■□□□□ 0.32
SNAI2O43623 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNAI2O43623 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNAI2O43623 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.04■□□□□ 0.32
SNAI2O43623 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.03■□□□□ 0.32
SNAI2O43623 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SNAI2O43623 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNAI2O43623 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNAI2O43623 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNAI2O43623 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.02■□□□□ 0.32
SNAI2O43623 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNAI2O43623 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SNAI2O43623 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNAI2O43623 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNAI2O43623 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNAI2O43623 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SNAI2O43623 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.02■□□□□ 0.31
SNAI2O43623 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SNAI2O43623 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 C9orf163-202ENST00000624034 2573 ntBASIC17.01■□□□□ 0.31
SNAI2O43623 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNAI2O43623 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SNAI2O43623 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.01■□□□□ 0.31
SNAI2O43623 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SNAI2O43623 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17■□□□□ 0.31
SNAI2O43623 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNAI2O43623 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17■□□□□ 0.31
SNAI2O43623 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17■□□□□ 0.31
SNAI2O43623 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNAI2O43623 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNAI2O43623 SMPD5-203ENST00000639008 1464 ntBASIC16.99■□□□□ 0.31
SNAI2O43623 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.99■□□□□ 0.31
SNAI2O43623 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNAI2O43623 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNAI2O43623 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNAI2O43623 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNAI2O43623 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SNAI2O43623 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNAI2O43623 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNAI2O43623 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.98■□□□□ 0.31
SNAI2O43623 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SNAI2O43623 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNAI2O43623 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNAI2O43623 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNAI2O43623 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.98■□□□□ 0.31
SNAI2O43623 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.98■□□□□ 0.31
SNAI2O43623 AC060814.1-201ENST00000554326 538 ntBASIC16.98■□□□□ 0.31
SNAI2O43623 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.98■□□□□ 0.31
SNAI2O43623 MIR3648-2-201ENST00000581792 180 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms